| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0906 |
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| Symbol | |
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| ID | 6286241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 962408 |
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| End bp | 963442 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642624470 |
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| Product | pseudouridine synthase, RluA family |
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| Protein accession | YP_001898488 |
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| Protein GI | 187928001 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.447686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0333397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGAGT TACGCCATCC ATTTGATGGC CGCATTCAAC AGGCCGGACG TGGCACACTC
GGCGATGCGC TCGACGGCAA GTCAGTCGCC TATGTTGAAA TCGGTGAAGA CGCCGAAGGG
CAGCGCATCG ACAATTTCCT GATGCGCGTG GCCAAGGGCG TGCCCAAGAG CCATATCTAC
CGCATCCTGC GTTCCGGCGA GGTGCGAGTC AACAAAGGCC GCATCGACGC GGAATACCGT
CTGAAACTCG GCGATCTGGT TCGTATTCCG CCGCTGCGGA TTGCCCAGCA GGTGGAAGCG
GCCCGCCCTG TGCCGGCGGC AGAATTCACG ATCCTTCACG AAGATACGCA TCTTTTGGTG
ATCGATAAGC CCGCCGGGGT GGCCGTGCAC GGCGGCTCCG GGGTGGCCTT CGGGGTGATT
GAACAATTGC GTCAGTCGCG CCCCGACGCC AAGTTCCTGG AACTGGTGCA CCGCCTCGAC
CGCGAAACGT CGGGCGTGCT GCTGCTTGCA AAAAAACGCT CTGCGCTGGT GGCGCTGCAT
GAGCAGATCC GCGAAGGCCA GTTGGACAAG CGGTACTTTG CGGCGGTGAA GGGCGTCTGG
CCGCACAAGC GACAACACAT CAAGTCGCCA CTGCACAAAT ACACCACGCC GGAAGGCGAG
CGCCGCGTGC GCGTGCAGGC CGATGGGCAG GCGTCGCACA CGATCTTCAA CAAGGTCGGC
GTGTTTGGCC CATACACGTT GCTGGAGGCC GAACTGAAGA CCGGGCGCAC GCACCAGATC
CGGGTGCATT TGGCCCACGC GGGTTTTCCA ATCCTGGGCG ACGACAAGTA CGGCGACTTC
GCCCTGAACA AGGCGCTATC CCGCGCGAAT GCTTCGCCGC GACTGGCGCG GATGTTCTTG
CATGCGCATC GCCTACAACT GACGCATCCG CATAGCGGTG AAGTCGTCAC GTTCAATGCG
CCGTTGCCCG CCGAGTGTAC CGATTTCCTC AACGCTTTCC AGGGCCCCGA TTCCGATGCC
GCAGCAGCGC TTTGA
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| Protein sequence | MNELRHPFDG RIQQAGRGTL GDALDGKSVA YVEIGEDAEG QRIDNFLMRV AKGVPKSHIY
RILRSGEVRV NKGRIDAEYR LKLGDLVRIP PLRIAQQVEA ARPVPAAEFT ILHEDTHLLV
IDKPAGVAVH GGSGVAFGVI EQLRQSRPDA KFLELVHRLD RETSGVLLLA KKRSALVALH
EQIREGQLDK RYFAAVKGVW PHKRQHIKSP LHKYTTPEGE RRVRVQADGQ ASHTIFNKVG
VFGPYTLLEA ELKTGRTHQI RVHLAHAGFP ILGDDKYGDF ALNKALSRAN ASPRLARMFL
HAHRLQLTHP HSGEVVTFNA PLPAECTDFL NAFQGPDSDA AAAL
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