Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0879 |
Symbol | |
ID | 6286214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 933052 |
End bp | 934092 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642624443 |
Product | transcriptional regulator, LacI family |
Protein accession | YP_001898461 |
Protein GI | 187927974 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0496177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.310275 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCA TCAAAGACGT GGCCGCACTG GCCGGAGTTT CGTTCACCAC CGTCTCGCAC GTCATCAACA ACACACGACC GGTCAACGCC GAGACGCGCA AGCGCGTGGA AGAGGCCATC CGGGCCACGC GCTATGTGCC CAGCGCCGTG GCGCGCTCGC TCAAACACCG CACCACGCGC ACCATCGGCG TGCTCGTGCC CACCGCCACC AACCCCTACT TTGCGGAGCT GGCGCGGGGC ATTGAAGATG TGTGTGCCGC CGCCGGCTAC AGCGTCATCC TCTGCAACTC CGACGACGAC CCCCGCAAGC AGCGCGACTA CCTGCGCGTG CTGATGGAAA AACGCGTTGA CGGCATCATC GTCAGCAGCG CCGGGCCAGA CACGGCGTTG GTCGAAGCGC TCGGTGAATC CGCCCTGCCC ATCGTGATGG TCGACCGCCC GACCGAAGGC ATCCAGGCCG ATCAGGTCCA AGTCGATCAC GAAGAAGGCG CGTACATGGC GACCAAGCAT CTGCTGGACC TCGGCCACCG CCGCATCGCC TGCATCAGTG GGCCTTCGGC ATTGAGCGTG ACGGCGGAGC GCCTGGCCGG TTTCCACCGC GCGCTGCGCG AGGCGGGCGT GCCCGAAGCC ACCGCCCGCA TTGCCGAAGG CGATTTCACC AGCCCCGGCG GCTACCGCGC CGCGCGCCAG CTGCTGACCG AAGGCGAGAT GCCCACGGCC ATCTTTGCCG GCAATGACCT GATGGGCATC GGTGCGCTGC GCGCCGCGGC GGAACTGGGC ATTCCCGTGC CGAAGGCGCT GTCCGTGATG GGTTTTGACG ACATCGAACT GAGCCGCTAC GTCTATCCCG CGCTGTCCAC TGTCGGCCAA TCGATCCGCC AGTTGGGCGA GACCACCGCG CAGACGCTGC TCGAGCATCT CGGCGACAAC GCCTTGCGCC ATCCCGTGGA AGAGCCGCGT GCACGCCGCA TCGTGCTGCC GCCGCGCCTG TCTTTGCGCG AGTCGACCGC CGAGCCCGAG CGCCCCGCCC GCGCCGCCTG A
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Protein sequence | MATIKDVAAL AGVSFTTVSH VINNTRPVNA ETRKRVEEAI RATRYVPSAV ARSLKHRTTR TIGVLVPTAT NPYFAELARG IEDVCAAAGY SVILCNSDDD PRKQRDYLRV LMEKRVDGII VSSAGPDTAL VEALGESALP IVMVDRPTEG IQADQVQVDH EEGAYMATKH LLDLGHRRIA CISGPSALSV TAERLAGFHR ALREAGVPEA TARIAEGDFT SPGGYRAARQ LLTEGEMPTA IFAGNDLMGI GALRAAAELG IPVPKALSVM GFDDIELSRY VYPALSTVGQ SIRQLGETTA QTLLEHLGDN ALRHPVEEPR ARRIVLPPRL SLRESTAEPE RPARAA
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