Gene Rpic_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0878 
Symbol 
ID6286213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp932049 
End bp933014 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content69% 
IMG OID642624442 
Productribokinase 
Protein accessionYP_001898460 
Protein GI187927973 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID[TIGR02152] ribokinase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0605401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.165576 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGCCA AGCGCCCTTC CGCCTCTTCC GCGCACCCCG CTGCCGACGT GCTGATCGTC 
GGCAGCCTGA ATATGGATCT CGTGATCCGC ACGCCCCGCT TGCCGCGTCC CAGGCAAACG
GTTGCAGCGC CTGCGCTGGA AACCATCCCG GGCGGCAAGG GCGCCAACCA GGCAGTGGCC
GCTGCACGCC TGGGGGCCCG TGTCGCCATG CTCGGCTGCG TGGGTGATGA CGCGTACGGC
ACCGCGCTGC GCGACGGCCT GCGCCGCGAA GGCGTGGACA CATCGATGGT GTCGGAGCAC
GCCGGGGTGG CCACCGGCAT CGCCTGCGTG ACCGTGGCCA ACAGCGGCCA GAACACCATC
GTCATCGTGG CCGGCGCCAA CGAGTTGCTG ACGCCAACGA TGATCGAAGC CCAGCGTGCT
GCGTTCGAAC GCGCGCGCGT CATCGTCTGT CAGTTGGAAT CGCCGCCCGA TGCGGTGGAA
TGCGCCCTCA AGCTGGGCCA GCGGCTTGGC AAGACGGTCA TCCTGAACCC TGCACCCGCC
ATCGGCCCCT TGCCTACGCC GTGGATCGCC GCCTGCGATT ACCTGATCCC GAACGAAACC
GAAGCCGCGC TGCTGACGGC CCGGCCAGTC GATTCGCCCG AAGCCGCACT GGATGCCGCT
GCCGATCTCC ACGCACAAGG TGCGCGGCAC GTGATTGTCA CGCTGGGCGC GCACGGCGTT
GCCTACGTGG ATGCCCACTC GCGCCTGCTG ATGCCGGCGC CCACCGCGCA TGCCATCGAT
ACCACTGCCG CTGGCGATAC GTTCGTGGGT GCGCTGGCAG CGGCATTGGC GGAAGACGCG
GCAGCCGATG CAGCCATCGA GTTTGGGCAA GCCGCGGCGG CCGTGTCAGT CACGCGGCTC
GGCGCGCAGC CGTCCATTCC GTTCCGCAGC GAGCTGGGTG CGCCTGCCGC GCCTGCCACC
CACTAG
 
Protein sequence
MVAKRPSASS AHPAADVLIV GSLNMDLVIR TPRLPRPRQT VAAPALETIP GGKGANQAVA 
AARLGARVAM LGCVGDDAYG TALRDGLRRE GVDTSMVSEH AGVATGIACV TVANSGQNTI
VIVAGANELL TPTMIEAQRA AFERARVIVC QLESPPDAVE CALKLGQRLG KTVILNPAPA
IGPLPTPWIA ACDYLIPNET EAALLTARPV DSPEAALDAA ADLHAQGARH VIVTLGAHGV
AYVDAHSRLL MPAPTAHAID TTAAGDTFVG ALAAALAEDA AADAAIEFGQ AAAAVSVTRL
GAQPSIPFRS ELGAPAAPAT H