Gene Rpic_0866 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0866 
Symbol 
ID6287914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp917211 
End bp917609 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content62% 
IMG OID642624430 
Productputative periplasmic cytochrome type-C oxidoreductase signal peptide protein 
Protein accessionYP_001898448 
Protein GI187927961 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.525765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.43414 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TCTCCCTCGC AATCTCGTTC AATCTGGGCG CGCTGATGCT GGCTGCCACC 
GTGTCGGCGC AAGCTGCCGA TATTGAAAAG GGCAAGCAAC TGGTGGAGAA GGGCGCTTGC
GTGGCCTGCC ATGGCGCCGG CCTGAACGCG CCGATCTCGC CGGACTATCC GAAGCTCGCC
GGCCAGCACG GCGACTATAT CTATCACGCG CTGCTGGCCT ATCAGACCAG CAACAACCCG
CTGGTGGGCC GCAGCAACGC CATCATGGCG GGCCAGGTCA ACAGCAACCC TGCCACGATC
GGTGCCGACG GTAAGCCGCG TCCCTTCACG CAGGCTGAGC TGAAGGATAT TGCCGCGTAC
ATCGAATCGC TGCCGGGCTC GCTGGTGCTG AAGAAGTGA
 
Protein sequence
MKKISLAISF NLGALMLAAT VSAQAADIEK GKQLVEKGAC VACHGAGLNA PISPDYPKLA 
GQHGDYIYHA LLAYQTSNNP LVGRSNAIMA GQVNSNPATI GADGKPRPFT QAELKDIAAY
IESLPGSLVL KK