| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0852 |
|---|
| Symbol | |
|---|
| ID | 6289479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 905610 |
|---|
| End bp | 906113 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642624416 |
|---|
| Product | Uracil-DNA glycosylase superfamily |
|---|
| Protein accession | YP_001898434 |
|---|
| Protein GI | 187927947 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3663] G:T/U mismatch-specific DNA glycosylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0607293 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.83582 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCTCA AGCGATGCTT TCCGCCCGTG GTCGACGCGC ACACGCGCGT GCTGATCCTG
GGCAGCCTGC CCGGTGAAGC ATCGCTTGCG CAATCGCAGT ACTACGCACA CAAGCAGAAC
CAGTTCTGGC GCCTGGTTGG TGAGGTCATC GGCCAGGACC TTGCCGGCAT GGAGTACGGC
GCGCGCCTGC AAGCATTGCT CGCCCATCGC CTCGGCTTAT GGGATGTGGT GGCCGAGGCC
AGGCGCGAAG GCAGTCTCGA CAGCAAGATC CGGGACCACG CTGGCAACGA CCTCTCCAGC
TTGATTGCCT CGTTGCCAAA CCTGGCGGTG ATTGCCTTTA ATGGCGGCAC GGCCGAGCGC
ATCGGCTTGA AAGCGCTCGG CTCGCATGGC GGCAGTTATC GGATTGTCCG GCTCCCCTCC
AGCAGTCCGG CGCATACGAT GCCGTACGCG GAAAAACTGC ATGCTTGGCG CGAGTTGGAG
TCATGGCTCG GTAAAGCTGA CTGA
|
|---|
| Protein sequence | MTLKRCFPPV VDAHTRVLIL GSLPGEASLA QSQYYAHKQN QFWRLVGEVI GQDLAGMEYG
ARLQALLAHR LGLWDVVAEA RREGSLDSKI RDHAGNDLSS LIASLPNLAV IAFNGGTAER
IGLKALGSHG GSYRIVRLPS SSPAHTMPYA EKLHAWRELE SWLGKAD
|
|---|
| |