Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0831 |
Symbol | |
ID | 6289028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 877083 |
End bp | 879425 |
Gene Length | 2343 bp |
Protein Length | 780 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642624395 |
Product | DNA topoisomerase IV subunit A |
Protein accession | YP_001898413 |
Protein GI | 187927926 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.718919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACAAC AAGACATCCT CTTCGACCCC AGCGAGCCGG CCGAAGCGCT CACGCTTGGC GCCTATGCTG AGCGCGCTTA CCTCGACTAC GCCATCAGCG TGGTCAAGGG CCGCGCACTG CCCGAGGTGG CCGATGGCCA GAAGCCGGTG CAGCGCCGCA TCCTGTTCGC GATGCACGAG ATGGGCCTGC GCTCCGATGC CAAGCCTGTC AAATCGGCGC GCGTGGTCGG CGACGTGCTG GGCAAATTCC ACCCGCATGG CGATCAATCC GCCTACGACG CACTCGTGCG CCTGGCGCAG GATTTCTCGC TGCGTTACCC GCTGATCGAC GGGCAGGGCA ACTTCGGCTC GCGCGACGGC GACGGTGCGG CGGCGATGCG CTATACCGAA GCGCGCCTCA CGCCCATTTC GCGTCTGCTG CTCGAAGAGC TGGACCAGGG CACCGTCGAT TTCATCCCGA ACTACGACGG CTCGATGGAA GAGCCGAAGC TGCTGCCAGC GCGCTTGCCG TTCGTGCTGC TCAACGGCGC ATCGGGCATT GCGGTCGGGA TGGCCACGGA GATCCCGTCG CACAACCTGC GCGAAGTGGC GGCCGCCACC GTGGCGCTCA TCCGCGACGA CAAGCTCACC AGCACCGACC TGATGCAGTA CATGCCGGGG CCGGACTTTC CGGGCGGCGG GCAGATCATC TCGTCGGCGG CCGACATTGC GCAGGTGTAT GAAAGCGGTC GCGGCAGCCT GAAGGTGCGT GCGCGCTGGA AGATCGAAGA ACTCGCGCGC GGCCAGTGGC AGCTCGTGGT GAACGAATTG CCGCCGAACA CCTCGTCGCA GAAGGTGCTG GAAGAGATTG AAGAGCTGAC GAACCCGAAG GTGCGCACGG GCAAGAAGTC GCTGTCGCCG GATCAGCTCA CCATGAAGCA GACCATGCTG GGCCTGCTTG ATGCCGTGCG CGACGAATCC GGCAAGGACG CTCCGGTGCG CCTCGTGTTC GAGCCCAAGA GCAAGAACAT CGACCAGCAG GAATTTGCCA ATGCATTGCT GGCCCACACA TCGCTGGAGT CGGGTGCGGC CATCAACCTG GTGATGATCG GCACGGATGG CCGTCCGCGC CAGAAGGGCC TGGCAGAGAT CCTGCGAGAG TGGATCGTCT ACCGCTTCGC CACGGTCACG CGTCGCACGC GCCATCGTCT GGGCAAGGTG GAAGACCGTA TCCACATCCT CGAAGGGCGG CAGTTGGTTC TGCTGCGCAT CGAAGACGTG ATCCGCATCA TCCGTGAGAG CGAAGACCCG AAGGCCGCGC TGATCCAGGT CTTCAACCTG AGCGATCGCC AGGCCGAAGA CATTCTGGAA ATCCGCCTGC GTCAGCTTGC TCGCCTGGAA GCGATCAAGA TCGAGCAGGA GCTGAAGAAC CTGCGCGAAG AGCAGGGCGA GCTGGACGTG CTGCTGAAGT CCGAGACCAT GATGCGCCGT CGCATCATCA AGGAGATCGA GACCGACGCG AAGCAATACG GTGACGACCG CCGCACCTTC ATCCAGGAAG AGCGCCGCGC CGCAGCCGAA GTGAAGGTCG TTGATGAACC CGTCACGGTG ATCGTTTCGC AGAAGGGCTG GGTGCGTACG CGCCAGGGCC ATGGCCACGA CGCCACGCAA TTCACCTTCA AGGCAGGCGA CACGCTCTAC GACACGTTTG AATGCCGGAC CACCGATGCG CTGTTGATCT TCGGCACGCG CGACGACAAG GGCACGGGCC GGGTCTATTC CGTGGCCGTG GCGAACCTGC CCGGCGGCCG TGGCGACGGC GTGCCGCTGA CGACGCTGAT CGAACTCGCG CCGGGTACGC ACATCGCCCA CACGTTCGCA GGCCATGCCG AACAGAATCT GGTGATTTCC ACGCGCGGCG GCAACGGCTT CCTGGCCAAG GTGGGTGACA TGGTCGGCCG CCAGAAGGCT GGCAAGGCGT TCCTGACGCT GGATGAGGGC GACCAGCCCA ACAAGCCAGC GCCGGTGCCG GCTGACGCCT ATGGCGTGGC GTGCCTGTCC GAAGGCGGCC GCATGCTGCT CTTCCAGATC AGCGAGTTGA AGACGCTCGC CAGCGGTGGT CGTGGCGTGA TCCTGATGGA ACTGGAGAAG AACGAAGCGC TGCTTCAGGC AGTGGCCTTC GGTGCAGCGG GCTTCGTGCT CTCGGGCACC GGCCCGCGCG GCGGCAAGGC GGTCGAGCAG ACCATGACGA CCCGCGCGCA AGAGCCGTAC GCCGGCAAGC GCGCACGCAA GGGCAAGACG CTCGAGCCCA AGCTGCGCGA CCCGAAGCTC TCGTTGCCCA AGCCCGCGCC GGACGCCGCC TGA
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Protein sequence | MEQQDILFDP SEPAEALTLG AYAERAYLDY AISVVKGRAL PEVADGQKPV QRRILFAMHE MGLRSDAKPV KSARVVGDVL GKFHPHGDQS AYDALVRLAQ DFSLRYPLID GQGNFGSRDG DGAAAMRYTE ARLTPISRLL LEELDQGTVD FIPNYDGSME EPKLLPARLP FVLLNGASGI AVGMATEIPS HNLREVAAAT VALIRDDKLT STDLMQYMPG PDFPGGGQII SSAADIAQVY ESGRGSLKVR ARWKIEELAR GQWQLVVNEL PPNTSSQKVL EEIEELTNPK VRTGKKSLSP DQLTMKQTML GLLDAVRDES GKDAPVRLVF EPKSKNIDQQ EFANALLAHT SLESGAAINL VMIGTDGRPR QKGLAEILRE WIVYRFATVT RRTRHRLGKV EDRIHILEGR QLVLLRIEDV IRIIRESEDP KAALIQVFNL SDRQAEDILE IRLRQLARLE AIKIEQELKN LREEQGELDV LLKSETMMRR RIIKEIETDA KQYGDDRRTF IQEERRAAAE VKVVDEPVTV IVSQKGWVRT RQGHGHDATQ FTFKAGDTLY DTFECRTTDA LLIFGTRDDK GTGRVYSVAV ANLPGGRGDG VPLTTLIELA PGTHIAHTFA GHAEQNLVIS TRGGNGFLAK VGDMVGRQKA GKAFLTLDEG DQPNKPAPVP ADAYGVACLS EGGRMLLFQI SELKTLASGG RGVILMELEK NEALLQAVAF GAAGFVLSGT GPRGGKAVEQ TMTTRAQEPY AGKRARKGKT LEPKLRDPKL SLPKPAPDAA
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