| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0829 |
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| Symbol | |
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| ID | 6289026 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 874141 |
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| End bp | 876126 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642624393 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_001898411 |
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| Protein GI | 187927924 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.849515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAA CCTCCCAATA CAGCGAATCG TCGATCAAGG TCCTCAAGGG CCTGGAACCG
GTCAAGCAAC GGCCGGGCAT GTACACGCGC ACCGACAATC CCCTGCACAT CGTGCAGGAA
GTCATCGACA ACTCCGCTGA CGAGGCGTTG GGCGGCTACG GCAAGCTGAT TGCCGTGACG
CTGCACAAGG ACGGCAGCGT GAGCGTGGAA GACGATGCGC GGGGCATCCC TGTCGGCATC
CACCCCGAAG AGGGCGTGCC GGTGGTCGAG ATCGTCTACA CGCGCCTGCA TGCTGGCGGC
AAGTTCGACA AGGGCCGCGG CGGCGCATAC GCGTTCTCCG GCGGCTTGCA CGGCGTGGGG
GTGTCGGTCA CGAACGCGCT GTCGACGCGG CTGGAAGTGA CGGTCTGGCG TGACGGCAAC
GTGTCGACGC TCGCATTCTC CGGTGGCGAC GTGATCGAAC CGTTGACCAC CCGCAAGGCC
GAACGCGGCG AGAAGAAGAG CGGCACGCGC GTGCGTGCGT GGCCGGACGC CAAGTATTTC
GATTCCGAGA ACATCCCGCA GGCCGAGCTG CAGCGCTTGC TGCGCAGCAA GGCCGTGCTG
CTGCCGGGCG TGAAGGTCAC GCTCACGCTG GAAAGAACCG GCGAGACGCT CGAATGGCAA
TACGACCAGG GCCTGCGCGG CTATCTGGTC GAATCGCTTG CGCAGGGCAG CGGTGCCGAG
CCGGTGATCC CGCTGTTTGA AGGCGAACAC TTTGCCGACC CTGACAAGCC CGGCGAAGAA
GGTTTTGCCT TCGGCGAAGG CGCATCGTGG GTGGTGGCCT GGACGGAAGA GGGCTCGCCG
GTGCGTGAGT CATACGTCAA CCTCATCCCG ACGCCCGCCG GCGGCACGCA CGAATCCGGT
TTGCGCGAAG GCCTGTTTCA GGCCGTGAAG AGCTTTGTCG AGATGCACGC GCTCCTGCCC
AAGGGCGTCA AGCTGATGTC CGAAGACGTG TTTGCGCGCG CTTCGTTCGT GCTGTCGGCC
AAGGTGCTCG ACCCGCAATT CCAGGGTCAG ATCAAGGAAC GCCTGAATAG CCGCGATGCG
GTGCGCCTGG TGTCCACCTT CAGCCGCCCG GCGCTGGAAC TGTGGCTGAA CCAGCACGTC
GAGCACGGCA AGAAGCTGGC CGAACTCGTC ATCAAGCAGG CGCAGGCGCG TACACGTGCC
GCGCAGAAGG TCGAGAAGAA GAAGGGCTCC GGTGTGGCCG TGCTGCCCGG CAAGCTGACC
GACTGCGAAT CCGACGACGT CACCCGCAAC GAACTCTTCC TGGTGGAAGG CGATTCCGCC
GGCGGCTCGG CCAAGATGGG CCGCGACAAG GAATTCCAGG CCATCCTGCC GTTGCGCGGC
AAGGTGCTGA ACACCTGGGA AACCGAGCGC GACCGCCTGT TCGCCAATAA CGAGGTGCAT
GACATTGCGG TCGCCATCGG CGTGGACCCG CACGGGCCGA ACGATACGGT CGACCTCTCC
GGCCTGCGCT ACGGCAAGAT CTGCATCCTG TCCGATGCTG ACGTGGACGG GGCGCACATC
CAGGTGCTGC TGCTCACGTT GTTCTTCAAG CACTTCCCGC AATTGATCGA TCGCGGGAAC
GTATGCGTGG CCCGTCCGCC GCTGTATCGT GTCGATGCCC CGGCGCGTGG CAAGAAGCCC
GCGCAAAAGC TCTACGCGCT GGATGACGGC GAGTTGGAAG CCATTGAAGA CAAACTGCGC
AAGGATGGCG TGAAAGAGGG CGCCTGGCAG ATTTCCCGCT TCAAGGGCTT GGGCGAAATG
AGCGCCGAGC AGCTCTGGGA AACCACCATG AACCCCGACA CGCGCCGTCT GCTGCCCGTG
GCGCTGGGCG AACTGGGCCA AGACCAGACC ATCAACATGA TGAACATGCT GATGGGCAAG
GGCGAAGCCG GCGCGCGCCG CACGTGGCTG GAAGCGCGCG GCAACGAAGT CGAAGCCGAT
ATCTGA
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| Protein sequence | MSKTSQYSES SIKVLKGLEP VKQRPGMYTR TDNPLHIVQE VIDNSADEAL GGYGKLIAVT
LHKDGSVSVE DDARGIPVGI HPEEGVPVVE IVYTRLHAGG KFDKGRGGAY AFSGGLHGVG
VSVTNALSTR LEVTVWRDGN VSTLAFSGGD VIEPLTTRKA ERGEKKSGTR VRAWPDAKYF
DSENIPQAEL QRLLRSKAVL LPGVKVTLTL ERTGETLEWQ YDQGLRGYLV ESLAQGSGAE
PVIPLFEGEH FADPDKPGEE GFAFGEGASW VVAWTEEGSP VRESYVNLIP TPAGGTHESG
LREGLFQAVK SFVEMHALLP KGVKLMSEDV FARASFVLSA KVLDPQFQGQ IKERLNSRDA
VRLVSTFSRP ALELWLNQHV EHGKKLAELV IKQAQARTRA AQKVEKKKGS GVAVLPGKLT
DCESDDVTRN ELFLVEGDSA GGSAKMGRDK EFQAILPLRG KVLNTWETER DRLFANNEVH
DIAVAIGVDP HGPNDTVDLS GLRYGKICIL SDADVDGAHI QVLLLTLFFK HFPQLIDRGN
VCVARPPLYR VDAPARGKKP AQKLYALDDG ELEAIEDKLR KDGVKEGAWQ ISRFKGLGEM
SAEQLWETTM NPDTRRLLPV ALGELGQDQT INMMNMLMGK GEAGARRTWL EARGNEVEAD
I
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