Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0772 |
Symbol | |
ID | 6287961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 817827 |
End bp | 818387 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642624336 |
Product | putative signal peptide protein |
Protein accession | YP_001898355 |
Protein GI | 187927868 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.253516 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.00200061 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCACAAGA GTCTCAAACT CAAACATCTG ATCGTGGTGG CTGGTTTCGC TCCGCTGTTT GCGTTCGCGC AGGCTGGCGA CGCTGACAAG ACGGCTGCCA TCAAGGACCT GCTGACGACG ATGAACGTCG ACGCGGCCAT CAAGGGTCAG GGTGAAGTGT TGGCCAGCGG CGCTAAGCAG GAAGCCCCGC TGGTGCTGGA GCAGGCACTG GTCGAGAACA AGACTCTGAA CGACAAGCAG AAGCAAGCCG CTGTCGACAA GCTGAAGAAG AACGGCGCCG TGCAGCGCAT GACCGACGGC GCTGGCAAGG ACTTCGACAC GGAAGCCTTC CGCAAGGACG CCCTGCAAGC CCACTATGAC TCGCTGGGCA AGTACTACTC GACCCAGGAA ATCAAGGATC TGACCACGTT CCTGAAAACG CCGAGCGGCC AGAAGTTCAT GGCTAACCAA GGCAAGGCCA TGCAGGAAGT GTGGGGCAAC GTGATGCAGA AGTACGGTCC GCAAGTCGGC AAGAAGATGC GCGACATGGC TGACAAGGAA GTTGCCGCTG CTGCGAAGTA A
|
Protein sequence | MHKSLKLKHL IVVAGFAPLF AFAQAGDADK TAAIKDLLTT MNVDAAIKGQ GEVLASGAKQ EAPLVLEQAL VENKTLNDKQ KQAAVDKLKK NGAVQRMTDG AGKDFDTEAF RKDALQAHYD SLGKYYSTQE IKDLTTFLKT PSGQKFMANQ GKAMQEVWGN VMQKYGPQVG KKMRDMADKE VAAAAK
|
| |