Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0689 |
Symbol | |
ID | 6286564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 727161 |
End bp | 727931 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642624252 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_001898272 |
Protein GI | 187927785 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.208396 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.278119 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGATA TCGTGATCGT GGCGAGCGCG TTCGGCGCCG CTCAGGTGCG CGCGCAGGGG CATCACGCCT ATGTTCCCCT GGCCGCGTCG GTCGGCGCAG CCGGCTTCGA GGTGCGGCGT GAATTGTTGC CCGCTGGGCT GGATGGCACG GTATCGGCTG ACTTACTGAC TGCATTGGGC CGCCTGATGG CAGCGCATGG TCTGTGGGCG GTCTATTCCA CGCCGGCCGC GCTGTACACG GACGTCGGCG CTCTGGACAC GGTCGCTGTC CGAGGTGCGC TGGTTGAAGC GCAAACCTTG GGTGCGCGCA TCGTGAAGTT CCAGCTTGGC GGCTTTGCCG GCGATGCGTC GGCGGAGTTG CTGGCCCGAC TCCTGCGAGG CTGGCGCGCA CGGGTGCTGG TCGAGAACGG TCAACAGGCG GTGGGCGGCT CCCTGGCGCA GTTCCGCAGT TTGTTCGACG CCTTGGAAAG GGCGGATGCG GCGGACATGC TGGGCATGAC GTTCGACGTT GGTAACTGGG AATGGTCGGG CGAAGCGCCG CTGGCGTGCG CGCGGGCCCT GGCCCCGTAC GTCGAATACA TCCATTGCAA GAGCGTCGGG GGCGAGGGGG CACGCCGCTT TGCGGTGGCG CCGGCTGGAA ACGATACGCG GTTCTTGGCT GTGCTGGCGG CATTGCCGGG CGATGTCCCG CGCGGCATCG AATTTCCGTT CGACGCGGTC GATCCTGTCG CCGATGCCCA TCAACACGTC ATGTGGCTCA AGGCCGCCTG A
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Protein sequence | MADIVIVASA FGAAQVRAQG HHAYVPLAAS VGAAGFEVRR ELLPAGLDGT VSADLLTALG RLMAAHGLWA VYSTPAALYT DVGALDTVAV RGALVEAQTL GARIVKFQLG GFAGDASAEL LARLLRGWRA RVLVENGQQA VGGSLAQFRS LFDALERADA ADMLGMTFDV GNWEWSGEAP LACARALAPY VEYIHCKSVG GEGARRFAVA PAGNDTRFLA VLAALPGDVP RGIEFPFDAV DPVADAHQHV MWLKAA
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