| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0676 |
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| Symbol | |
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| ID | 6288854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 715869 |
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| End bp | 716303 |
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| Gene Length | 435 bp |
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| Protein Length | 144 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642624238 |
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| Product | type IV pilin |
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| Protein accession | YP_001898259 |
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| Protein GI | 187927772 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.256255 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.685259 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAG GACTCTCTCG CTCTCGGCGT TTGCCCCGCG GCTTCACATT GGTTGAGCTG
ATGATCACGG TCGCTATTGT GGGCATCCTC GCCGTCGTGG CGTATCCGTC GCTCAACGGC
TACATACAAA AGTCCAGGCG CGCGGATGCC AAAACGGCAT TGCTCGCGGT GGCTCAGAAA
ATGGAGCAAT ACCGCTCATT GGGCAACACC TACGCTGGCG CGACATTGGG CGCCAGCGGC
GTTTACGCCA ATACCAAGTC AGACAACGGC TACTACGCTC TGAGCTTCTC TGTCGTGCCT
ACGCAGACGG TCTATACGGT TCAAGCCGTT CCGCAGGCCG GTCAGGCAAC GGATGCATGC
GGTACCTTCA GCTACGATCA GGCGGGGAAT AAAATGGTAT CTGGGGGCAC GCTTACGGCA
TCGAGCTGCT GGTAG
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| Protein sequence | MNTGLSRSRR LPRGFTLVEL MITVAIVGIL AVVAYPSLNG YIQKSRRADA KTALLAVAQK
MEQYRSLGNT YAGATLGASG VYANTKSDNG YYALSFSVVP TQTVYTVQAV PQAGQATDAC
GTFSYDQAGN KMVSGGTLTA SSCW
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