Gene Rpic_0634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0634 
Symbol 
ID6289006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp674632 
End bp675756 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content57% 
IMG OID642624195 
ProductGlutamine--scyllo-inositol transaminase 
Protein accessionYP_001898217 
Protein GI187927730 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.797926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCGT TTCTCGACCT TAAGAGTATC AATGCGCGGC AACGAGCCGA ATTGATTTCA 
GCATTCACCG AAGTTCTCGA TGCCGGCTGG TTCATCCATG GCAAACAATG CGAAGCATTC
GAAGCCGACT TTGCCGCTTA CTGTGAAGCC AAGCACTGTA TCGGTATCAG TAACGGGTTG
GACGCGCTGC ATCTCATTCT GCGGGCCATG TCCATCGGAA AAGGTGACGA AGTCATCGTG
CCGTCCAACA CATTTATCGC TACATGGTTG GCGGTCACCT TCGCCGGAGC AACGCCGGTT
CCGGTGGAAC CACGCGAAGA CACGTGCAAT CTTGATCCTA GCTTGATAGC TGCGGCAATC
ACGCCTCGGA CGCGTGCAAT CATCCCCGTT CATCTGTATG GCCAGCCCGC AGATATGGAT
CCCATTCTGG AGATCGCGCA TCAACATGGT CTGAAAGTCA TCGAAGATGC CGCCCAATCT
CACGGGGCAC GATACCGCGG CAAGCGCACG GGCAGTCTTG GCGATGCGGC GGCCTTCAGC
TTCTACCCGG GAAAGAACCT CGGAGCGCTC GGCGATGGCG GCGCTGTGAC AACGTCCGAT
ACCGCATTGG CGCAACGCAT TAGGATGCTG TCCAACTATG GCTCTCAGAA AAAATATGTG
CATGAGGCGG CGGGGTTCAA TGCCCGGCTG GACGAAATTC AGGCCGCCAT GCTGCGCGCG
AAACTGGTAT TGCTTGACGC CGACAATGCG CGACGTCGCT CAATCGCCGA TCGCTACACG
AGGGCTCTGA TCGATTGCGG CCTCGGACTG CCCATCCTGG CCAATGATGT GGAATCAGCG
TGGCACATCT ACGCAATTCA CCACCCAAAC CGCGACGCGC TCCAGCGTGC GCTTAGCGAA
CGAGGGGTAG GTACAGTTGT GCACTACCCA ACGCCGCCAC ATCTACAAGG AGCTTACCGC
GACCTTCGTT TGGGAGAAGG CGCGTACCCG ATCAGCGAGC GGATCCATCG CGAAACGCTG
AGCCTTCCGA TGTCGCCGGT CATGACTGAC GTACAAGTGG ATGAAGTGAT CCACACAGTT
CGTTCGGTAT GTGGTGAGCT TGCAGTGGAT GTCACGAACC TGTGA
 
Protein sequence
MIPFLDLKSI NARQRAELIS AFTEVLDAGW FIHGKQCEAF EADFAAYCEA KHCIGISNGL 
DALHLILRAM SIGKGDEVIV PSNTFIATWL AVTFAGATPV PVEPREDTCN LDPSLIAAAI
TPRTRAIIPV HLYGQPADMD PILEIAHQHG LKVIEDAAQS HGARYRGKRT GSLGDAAAFS
FYPGKNLGAL GDGGAVTTSD TALAQRIRML SNYGSQKKYV HEAAGFNARL DEIQAAMLRA
KLVLLDADNA RRRSIADRYT RALIDCGLGL PILANDVESA WHIYAIHHPN RDALQRALSE
RGVGTVVHYP TPPHLQGAYR DLRLGEGAYP ISERIHRETL SLPMSPVMTD VQVDEVIHTV
RSVCGELAVD VTNL