Gene Rpic_0605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0605 
Symbol 
ID6288174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp642134 
End bp642658 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content68% 
IMG OID642624166 
Productprotein of unknown function DUF477 
Protein accessionYP_001898188 
Protein GI187927701 
COG category[S] Function unknown 
COG ID[COG3762] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.406364 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCA CGACCCGACA TCACCACGGC GCGCGCCGTG CCCTGACCCA TCTGCTGACA 
ACCTCGTCGC ATGCAAGGCG GGCGTTTCCG CCGGCGGATC TGCAAAAGCT TGAAGCCGCC
GTGCGCGAAG GCGAACAACA CCATCGCGGC GAAGTGCGCG TCGTCATCGA GAGCTCGTTG
CCCGTGCGCG ACGCCTGGGC CGGGATGTCG CCGCGGCACC GTGCCCGGAC GTTGTTCGGG
CTGCTGGAGG TGTGGAACAC GCGCGAGCAC GTGGGCGTGC TGCTCTACAT CAACCTGGCC
GATCACGCGG TCGAGATCCT GGCCGACCAC GGTATCGCCG CCAAGGTGGA CGCACACGCG
TGGCGCACCA TCTGCGCGAC CATCACGCGT GGCTTTGCGC AGCGCGTGAC CATGGCGCCG
GTGCTCGACG CGCTGGCGCA GATCAACGAC CTCCTCGCCG CGCACGTGCC TTCCGATGGC
ACGCCGCGCA CCAATGAGCT GAGCGACCGG CCGGTCGTGC TGTAA
 
Protein sequence
MASTTRHHHG ARRALTHLLT TSSHARRAFP PADLQKLEAA VREGEQHHRG EVRVVIESSL 
PVRDAWAGMS PRHRARTLFG LLEVWNTREH VGVLLYINLA DHAVEILADH GIAAKVDAHA
WRTICATITR GFAQRVTMAP VLDALAQIND LLAAHVPSDG TPRTNELSDR PVVL