Gene Rpic_0475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0475 
Symbol 
ID6288969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp508839 
End bp509720 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content63% 
IMG OID642624040 
Productsuccinyl-CoA synthetase subunit alpha 
Protein accessionYP_001898062 
Protein GI187927575 
COG category[C] Energy production and conversion 
COG ID[COG0074] Succinyl-CoA synthetase, alpha subunit 
TIGRFAM ID[TIGR01019] succinyl-CoA synthetase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGATTC TGATCAACAA AGACACCAAG GTCATCACCC AGGGGATCAC CGGTAAGACC 
GGCCAGTTCC ACACCCGCGG CTGCCGCGAC TACGCCAACG GCAAGAACGC CTTCGTGGCA
GGCGTGAACC CGAAGAAGGC CGGCGAAGAC TTCGAAGGCA TTCCCATCTA CGCAACCGTC
AAGGACGCCA AGGCCCAGAC CGGCGCGACC GTGTCGGTGA TCTACGTGCC GCCCGCTGGC
GCCGCTGATG CAATCTGGGA AGCTGTCGAA GCCGAACTGG ACCTGGTGGT TTGCATCACC
GAAGGCATCC CCGTGCGCGA CATGATGATG GTCAAGGACA AGATGCGTAA GGCCGGCAGC
AAGACGCTGC TGCTGGGCCC GAACTGCCCG GGCCTGATCA CGCCGGACGA AATCAAGATC
GGCATCATGC CGGGTCATAT CCACCGCAAG GGCCGCATCG GCGTGGTGTC GCGCTCGGGC
ACGCTGACGT ACGAAGCCGT GGGCCAGCTC ACCGCGCTGG GCCTGGGCCA ATCGTCGGCT
GTCGGTATCG GCGGCGACCC GATCAACGGT CTGAAGCACA TCGACGTGAT GAAGATGTTC
AACGACGATC CGGAAACGGA CGCCGTGGTC ATGATCGGTG AGATCGGCGG TCCGGACGAA
GCCAACGCGG CTTACTGGAT CAAGGACAAC ATGAAGAAGC CGGTGGTTGG CTTCATCGCT
GGCGTGACCG CGCCTCCGGG CAAGCGCATG GGCCACGCCG GCGCGCTGAT CTCGGGCGGT
GCCGACACCG CGCAAGCCAA GCTCGACATC ATGGAAGAAT GCGGCATCAA GACCACCAAG
AACCCGTCGG AAATGGCACG TCTGCTCAAG GCGATGCTGT AA
 
Protein sequence
MSILINKDTK VITQGITGKT GQFHTRGCRD YANGKNAFVA GVNPKKAGED FEGIPIYATV 
KDAKAQTGAT VSVIYVPPAG AADAIWEAVE AELDLVVCIT EGIPVRDMMM VKDKMRKAGS
KTLLLGPNCP GLITPDEIKI GIMPGHIHRK GRIGVVSRSG TLTYEAVGQL TALGLGQSSA
VGIGGDPING LKHIDVMKMF NDDPETDAVV MIGEIGGPDE ANAAYWIKDN MKKPVVGFIA
GVTAPPGKRM GHAGALISGG ADTAQAKLDI MEECGIKTTK NPSEMARLLK AML