Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0408 |
Symbol | |
ID | 6289654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 434743 |
End bp | 436113 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642623975 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_001897998 |
Protein GI | 187927511 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0921493 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG TCTTCATCAA AACCTACGGC TGCCAGATGA ACGAGTACGA CTCGGACAAG ATGTCCGACG TGCTCAACGC GGCTGAAGGT CTCGTCCCCA CCGACACGCC CGAAGATGCG GACGTGATCC TCTTCAACAC ATGCTCCGTA CGCGAGAAGG CGCAGGAGAA AGTGTTCTCC GAACTCGGCC GCGTGAAGGC GCTCAAGGCG CTCAAACCGG ATCTCGTGGT CGGCGTAGGT GGCTGCGTGG CCAGCCAGGA AGGTGCGTCC ATCGTGGCGC GCGCCCCTTA CGTTGACGTG GTGTTCGGGC CGCAGACGCT GCACCGCCTG CCCGACCTGA TCGCAGCACG CCGCCGCACG GGCCGCTCGC AGGTCGACGT GTCCTTCCCC GAGATCGAGA AGTTCGACCA CCTGCCGCCC GCGCGCGTGG ATGGCGCCAG CGCCTACGTG TCAATCATGG AAGGCTGCTC GAAATACTGC AGCTACTGCG TGGTGCCGTA CACGCGCGGC GAGGAAGTCT CGCGCCCGTT CGACGACGTG CTGGCCGAAG TGGCCGGCCT GGCCGAACAG GGCGTGCGCG AAGTCACGTT GCTGGGCCAG AACGTCAACG CCTACATCGG CAAGATGGGC GACACGAGCG AGCGTGCGGA TTTCGCGCTG CTGCTCGAAT ACGTGGCTGA GATTCCGGGT ATCGAGCGCA TCCGCTACAC GACCAGCCAC CCGAAGGAAT TCAGCTCGCG CCTGATCGAG GCCTATGCCA CCAACCCGAA GCTCGTCGAC CACCTGCACC TGCCCGTGCA GCACGGCTCC GACCGCATCC TGATGGCGAT GAAGCGCGGC TACACGGTGC TCGAATACAA GAGCAGCATC CGCAAGCTGC GCGCGATCCG GCCGAACATC TCGATCGCCA CCGACTTCAT CGTCGGCTTT CCGGGCGAGA CCGATGCAGA CTTCGCCAAG ACGATGGACC TGATTCACGA GATCGGCTAC GACACCTCGT TCAGCTTCAT CTACAGCCCG CGCCCGGGCA CGCCGGCCGC GAACCTGCAC GACGATACGC CCCAGGCCGT CAAGCTCGAA CGCCTAAAAC ACTTGCAGGC GACCATTGAA GAGAACGTGG CGCGCATCAG CCAAGGCATG GTCGGCAGCG TGCAGCGCAT TCTGGTGGAA GGCCCGTCGC GCAAGGATCC GACCGAACTG CACGGCCGCA CCGAGAACAA CCGCGTCGTC AACTTCGCGC TACCCGATCT GCCGCAGGTG CGCCGCGAAC AGCTGATCGG CCAGATGCTG GACGTGCGCA TCGTGCACGC GTTCCCGCAT TCGCTGCGTG GCGAAGTGGC CGAAGAGCGT ATGGCCAGCG CGGCTCACTG A
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Protein sequence | MKKVFIKTYG CQMNEYDSDK MSDVLNAAEG LVPTDTPEDA DVILFNTCSV REKAQEKVFS ELGRVKALKA LKPDLVVGVG GCVASQEGAS IVARAPYVDV VFGPQTLHRL PDLIAARRRT GRSQVDVSFP EIEKFDHLPP ARVDGASAYV SIMEGCSKYC SYCVVPYTRG EEVSRPFDDV LAEVAGLAEQ GVREVTLLGQ NVNAYIGKMG DTSERADFAL LLEYVAEIPG IERIRYTTSH PKEFSSRLIE AYATNPKLVD HLHLPVQHGS DRILMAMKRG YTVLEYKSSI RKLRAIRPNI SIATDFIVGF PGETDADFAK TMDLIHEIGY DTSFSFIYSP RPGTPAANLH DDTPQAVKLE RLKHLQATIE ENVARISQGM VGSVQRILVE GPSRKDPTEL HGRTENNRVV NFALPDLPQV RREQLIGQML DVRIVHAFPH SLRGEVAEER MASAAH
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