| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0406 |
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| Symbol | |
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| ID | 6289652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 432904 |
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| End bp | 433716 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642623973 |
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| Product | unkown domain/putative metalloprotease fusion protein |
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| Protein accession | YP_001897996 |
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| Protein GI | 187927509 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0319] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.122176 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAAG CAAAAACCGA TACCAAAGCA AAAACCAAGA AGACCCAACC CGCGGCCGCC
GAGTCATTCG GCCCGCGCGT CGACGTGTTC GACGCCCAGG GCAAACCCAG GACGGTGGAT
GCAAGCGCAC TGCGCATTGC CTTTGCCGAT GGCCGCAGCC TGATCCTCGG TCTGCCGAAT
ACCGTGGATG GGCCGATCAC CCTCGTTGCC GAGCACGCCG ACGCCGACAT GCACGCCATG
CTCTCGCTGC GCCCCGAGCA TCACGACAGC ATCACGTTGC GCATTGAAAC CCAGCCCGCC
GAATTGGCAG ACTCCACGGA AGAAGCCTTC GACGACGACA CCGCCGGCGC CGAAATGCTC
ACGCTCGACC TGACCGTGCA GTACGGCGAT GAACTCAAGG CTGCCGCTCG CAAGGCACTG
CCGAAAGAAC GCGACATCGA AGGGTGGATT GCCCCCGCAC TGTTTGCCGA TGCGCAGCTC
AACGTGCGCT TTGTCGGCGA AGAAGAAGGT CGCACGCTCA ACCGCACCTA CCGCGGCAAG
GACTACGCGA CCAACGTGCT GACCTTCTCT TACGCAGAGA GCGCAGAAGA CCCGGTCTCG
GCCGACATCG TGCTGTGCTG CACGGTGGTC GAAAAGGAAG CGAAGGAACA GAAGAAGCCG
CTGCTCGCGC ACTACGCACA CCTGATCGTG CACGGCGCAC TGCACGCCCA AGGCTACGAT
CACGAAGACG CGGCCGATGC AAAGGAAATG GAAGGCATCG AAACGGAAAT CCTCCGCGAC
CTCGGTTTTG CCGATCCGTA CGCAGATCGT TAA
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| Protein sequence | MAKAKTDTKA KTKKTQPAAA ESFGPRVDVF DAQGKPRTVD ASALRIAFAD GRSLILGLPN
TVDGPITLVA EHADADMHAM LSLRPEHHDS ITLRIETQPA ELADSTEEAF DDDTAGAEML
TLDLTVQYGD ELKAAARKAL PKERDIEGWI APALFADAQL NVRFVGEEEG RTLNRTYRGK
DYATNVLTFS YAESAEDPVS ADIVLCCTVV EKEAKEQKKP LLAHYAHLIV HGALHAQGYD
HEDAADAKEM EGIETEILRD LGFADPYADR
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