Gene Rpic_0398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0398 
Symbol 
ID6288501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp423313 
End bp424065 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content62% 
IMG OID642623965 
Productphospholipid/glycerol acyltransferase 
Protein accessionYP_001897988 
Protein GI187927501 
COG category[I] Lipid transport and metabolism 
COG ID[COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase 
TIGRFAM ID[TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.330397 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTTA TCCGTTCGCT GCTGTACCTG ATTTTCCTGA TTGTCTGGAC GCCGATCTAT 
GCGGTGGCCT GCTTCATCGT GTTCCCGTTC ATGAATCCGG CTCGCCGGTT CTGGATGGTG
TCGGGCTGGA CCAAATCCGC CATCTGGATG GCGCGCTGGC TGCTCGGCAT CCGTTGGCAA
TACCAGGGCT GGGAGCACAT CGAAGAAGCC GTCGCCACCA ACAAGCCGGT GGTGCTGCTC
TCCAAGCATC AGTCCGCGTG GGAAACCATG GCCTATGTCG CGACCATGCC TCGGCCGCTG
TGCTACGTAT TCAAGCGCGA GCTGCTGTAT GTGCCCTTCT TCGGCTGGGC GCTGGGCATG
CTCAAAATGG TGCACATCAA CCGCAAGGAC GGCGCCAACG CGTTCGCCTC GGTCGCACGT
CAGGGCAAGG AACGCATGGC CGAAGGCGCG TGGGTGATCA TGTTCCCGGA AGGCACCCGC
ACGCGCTCGG GCGACCCGAA GCCGCGCTAC AAGAGCGGCG GTGCGCGTTT TGCCGTGGAT
ACCGGCGCGT GGGTCATCCC GATCGCCCAC AACTCCGGCC GCGTGTGGCC GCGCAATTCG
TTCCTGAAGC ATCCGGGCCT GATCACGCTG TCGGTCGGTC CGGCCATCCC GACTGCAGGC
AAGACCAGCG ACGAACTCAA CCGCGAAGTC GAAGCATGGA TCGAAGCGGA AATGCGTAGA
ATCGACGCCG ATAGCTACCG CGAGCACGCA TGA
 
Protein sequence
MTFIRSLLYL IFLIVWTPIY AVACFIVFPF MNPARRFWMV SGWTKSAIWM ARWLLGIRWQ 
YQGWEHIEEA VATNKPVVLL SKHQSAWETM AYVATMPRPL CYVFKRELLY VPFFGWALGM
LKMVHINRKD GANAFASVAR QGKERMAEGA WVIMFPEGTR TRSGDPKPRY KSGGARFAVD
TGAWVIPIAH NSGRVWPRNS FLKHPGLITL SVGPAIPTAG KTSDELNREV EAWIEAEMRR
IDADSYREHA