Gene Rpic_0392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0392 
Symbol 
ID6287782 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp417550 
End bp419052 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content67% 
IMG OID642623959 
ProductSurA domain 
Protein accessionYP_001897982 
Protein GI187927495 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0760] Parvulin-like peptidyl-prolyl isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACG ACATCATGGC TTTCCAATCG ACCGCTTTCG CCACGCGTGT GGCTCCTCTG 
GGCCGCTTGC GTGTTGCCAC CGGCGTGCTG CTTGCGCTGT TGGCGGGGAC CACGCTGTCG
CCAGCCGTCC ACGCGCAGCA GGCGCAATCG GCAAAAAAGA GTGCACCGGT GCGGGGCATC
TTCGCCAACC CCGGTTCGTC GCCGAGCCAG CCGCTGCTGC AGGGCACGCT GCCCGAGCCA
ACGGCTCCAG GCGCGCCGCG CAGCCAGTTG GTCGACGAGG TGGTGGCTGT GGTCAACACC
GACGTCATCA CCCGCCGCGA ACTGCTCAAC CGCGCGGATC TGGTCGAGCG CACGTTCCGC
GCACAGAACC GCCCGCTGCC GCCGCGCGCC GATCTGCTCG GCGAAGTGCT TGAGCAGCTC
ATCCTGGAGC GCGTGCAGGC GCAGACCGCC AAGGAAAGCG GCATCCGCGT GTCCGACGCC
GATGTGGATC GCGCCGTGGA AAGCGTGGCC CAGCGCAACA ACCTGTCGGT GCCGCAGCTC
AAGAGCAAGC TGAAGGACGC CGGCATGACG TACGACAAGT ACCGCGACGA CCTGCGTCAG
GAAATCCTTC TGGCGCGCCT GCGTGAGCGC GAGGTCGACT CGAAGGTGCA GGTCTACGAC
GGCGAGATCG ACAACTATCT GGCGCAGCAG GGTGGCGGCA CGGCCCCGGC CGGCGAACAG
CAATACAACG TCGCGCAGAT TCTCGTGCCG GTCGCCGAAG GCGCCACGGA TGCCGAGAAG
GCCGCAGCGC GCAAGAAGGC CGAAGGCCTG CTCAAGCAAG CGCAGGGCGG CGCGGATTTC
GCCAAGCTGG CGCGTGACAA TTCTGGCGCG CAAGATGCCG CGCAAGGCGG CGAGCTTGGG
CTGCGGCCGA TCGGGCGCCT GCCGGCTGTG TTTGCCAACG CCGTGGTCGA CATGAAGGCG
GGCCAGGTGG CGAGCCAAGT GGTCGAAAGC CCGGCTGGTT ATCACGTGAT CAAGCTGTTG
GAGAAGCGCG CATCGAGCAC GGCCATTGCC GCCAAGGTGC AGCAGACGCA AGTGCGCCAC
ATCCTGATCA AGACCGGTCC GACGATGTCG GCGGACGACG CGCGCCGCCA GTTGGTGGGC
CTGCGTGACC GGATCGTCCA CGGCTACGAT TTTGGCGATG CGGCACGCCG GTATTCGCAG
GACGGCTCTG CCGGTGCGGG TGGCGAGCTG GGCTGGGTGT CGCCGGGCCA GCTGGTGCCG
GAATTTGAGC AGGCCATGAA CCAGCTCAAG CCGGGCGATG TGTCGCAGCC GGTGCAAAGC
CAGTTCGGTG TGCACCTGAT CCAGGTGGAA GGCCGCCGCG AGGCAGAGGT GTCGGGAGAC
CGCGAGCGCG ACTACGCGCG CTCGGTCATT CGCGAGCAGA AGGTGCAGGC CGCCTATGAG
GATTGGCTGC GTGAACTGCG CGATTCGGCA CACGTGGAAT ACCGCGTGAA CCGTCAGCAA
TAA
 
Protein sequence
MNNDIMAFQS TAFATRVAPL GRLRVATGVL LALLAGTTLS PAVHAQQAQS AKKSAPVRGI 
FANPGSSPSQ PLLQGTLPEP TAPGAPRSQL VDEVVAVVNT DVITRRELLN RADLVERTFR
AQNRPLPPRA DLLGEVLEQL ILERVQAQTA KESGIRVSDA DVDRAVESVA QRNNLSVPQL
KSKLKDAGMT YDKYRDDLRQ EILLARLRER EVDSKVQVYD GEIDNYLAQQ GGGTAPAGEQ
QYNVAQILVP VAEGATDAEK AAARKKAEGL LKQAQGGADF AKLARDNSGA QDAAQGGELG
LRPIGRLPAV FANAVVDMKA GQVASQVVES PAGYHVIKLL EKRASSTAIA AKVQQTQVRH
ILIKTGPTMS ADDARRQLVG LRDRIVHGYD FGDAARRYSQ DGSAGAGGEL GWVSPGQLVP
EFEQAMNQLK PGDVSQPVQS QFGVHLIQVE GRREAEVSGD RERDYARSVI REQKVQAAYE
DWLRELRDSA HVEYRVNRQQ