Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0382 |
Symbol | |
ID | 6288813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 404655 |
End bp | 405722 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642623949 |
Product | TIM-barrel protein, nifR3 family |
Protein accession | YP_001897972 |
Protein GI | 187927485 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0042] tRNA-dihydrouridine synthase |
TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAGATCG GACCGCATAC CCTTCGCAAC AACCTGTTCG TCGCTCCCAT GGCGGGTGTG ACGGATCGCC CGTTCCGGCA GCTCTGCAAG CGGCTGGGCG CGGGCTATGC CGTGTCCGAG ATGGTCGCGT CCAACGCGCA GCTCTGGAAA AGCGAGAAGA CCATGCGGCG CGCCAACCAC ACGGGCGAGG TCGAGCCGAT CGCCGTGCAG ATTGCCGGCG CCGAGCCGAT GATGATGGCC GAGGCCGCGC GCTACAACGT CGATCGCGGC GCGCAAATCA TCGACATCAA CATGGGCTGC CCGGCCAAGA AGGTGTGCAA CGTGGCCGCT GGTTCTGCCC TGCTGCAGAA CGAGCCGCTG GTCCAGCGCA TTGTCGAGGC CGTGGTGGGT GCGGTCGGCG ACCGCGTGCC CGTGACGCTC AAGATCCGTA CCGGTTGGGA CCGCGAACAC CGCAACGCAT TGAGCGTGGC GCGCATTGCA CAGGACGCCG GCATCAGCAT GCTGACCGTG CATGGCCGCA CGCGCGCCGA TCTGTATCAC GGTGAAGCGG AATACGACAC CATCGCCGCG GTCAAGGCGT CGGTGCGCAT TCCCGTGGTG GCCAACGGCG ACATCACCAC GCCGGCCAAG GCCAAGCACG TGCTGGCCGT GACCGGCGCC GACGCCATCA TGATCGGCCG CGCGGCGCAG GGGCGCCCGT GGCTGTTCCG CGAGATCGAG CATTTCCTGC AGACCGGCAC GCTGCTGCCG GCGCCGGAGG TGGAAGAGAT TCGCGGCATC ATGAACGCGC ATCTGGAAGA GCACTACGCG TTCTATGGCG AATACACCGG CGTGCGCACC GCACGCAAGC ACATCGCCTG GTACACGCGC GGGTTGGCGG GGGCCAACCT GTTCCGCCAC CGCATGAACA CCATCGAGGA CACCGCGGCC CAGTTGGCCG CCGTCAATGC GTTCTTCGAC GAGCAGCGTG CGCTGTCCGA CCGTCTGGTC TACGAAGACC AGGCGACCGG TGGCGACCAC CCCAGGACGG GCAACAACGA CAACAACAAG GAACTGCTTG CCGCATGA
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Protein sequence | MQIGPHTLRN NLFVAPMAGV TDRPFRQLCK RLGAGYAVSE MVASNAQLWK SEKTMRRANH TGEVEPIAVQ IAGAEPMMMA EAARYNVDRG AQIIDINMGC PAKKVCNVAA GSALLQNEPL VQRIVEAVVG AVGDRVPVTL KIRTGWDREH RNALSVARIA QDAGISMLTV HGRTRADLYH GEAEYDTIAA VKASVRIPVV ANGDITTPAK AKHVLAVTGA DAIMIGRAAQ GRPWLFREIE HFLQTGTLLP APEVEEIRGI MNAHLEEHYA FYGEYTGVRT ARKHIAWYTR GLAGANLFRH RMNTIEDTAA QLAAVNAFFD EQRALSDRLV YEDQATGGDH PRTGNNDNNK ELLAA
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