Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0304 |
Symbol | |
ID | 6289719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 320855 |
End bp | 321718 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642623872 |
Product | polysaccharide deacetylase |
Protein accession | YP_001897895 |
Protein GI | 187927408 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCAC CGATCACCCC GCCACTTGGC ACCGCCCGAC GCTGGAAGCC GAGCCCGCTG ATCAGCGGCG CGCTGGCCCT GCACGCTGGC GCAGCGGTTG CCGTTGCAGC AGATCCGTCG ACATGGCCGT GGGCGGGCGG CGGCGTCATC GCCTCGCATC TGGTGCTCAT GGCCGGCGGA CTATGGCCGC GCAGCACATG GCTCGGTCCC AACTGGACGC ATCTGCCCGC CACGGCCGGC CAGCGAATCG CAATGACCAT CGACGACGGC CCTGACCCCG ATGTCACGCC GCGCGTGCTG GACATACTGG ACCAGTACGG TGCCAAGGCC ACCTTCTTCT GCATCGGCGA ATTGGCGCAG CGGCACCCGC GCTGCGTCGA GGCCATCGTC GCGCGCGGGC ACGCGGTGGA AAACCACAGT CAGCGCCACC GGCATACGTT CTCGCTGAAG GGGCCAGGCG CGTTGCGGCG CGAGATTGCT GCCGCACAGG ACACGCTCAC GCAAATCACC GGCACGCGCC CGCTGTTCTT CCGCGCGCCG GCCGGACTGC GCAACCCGTT TCTGGAGCCC GTGCTGTGCC AGCTTGGCCT GCAACTGGCG AGCTGGACGC GCCGCGGCTT CGATACCCGC TCGCGCAATC CCGAAGCCGT CACCCAACGC CTGCTGCACG GTCTGGCGCC GCAAGACATC CTGCTGCTCC ACGACGGCCA TGCGGCGCGC GATGCACACG GCGACCCCGT CCTGCTGACC GTATTGCCGA AGGTGCTCGA AACCGCCGCG CGCGCGCAAT TGCAGTGCAC GACGTTGCGC GCTGCCCTCG CGCCGGAGCC CGCGCAGGCC ACGCGCTCGC AAATGACCAT TTGA
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Protein sequence | MNAPITPPLG TARRWKPSPL ISGALALHAG AAVAVAADPS TWPWAGGGVI ASHLVLMAGG LWPRSTWLGP NWTHLPATAG QRIAMTIDDG PDPDVTPRVL DILDQYGAKA TFFCIGELAQ RHPRCVEAIV ARGHAVENHS QRHRHTFSLK GPGALRREIA AAQDTLTQIT GTRPLFFRAP AGLRNPFLEP VLCQLGLQLA SWTRRGFDTR SRNPEAVTQR LLHGLAPQDI LLLHDGHAAR DAHGDPVLLT VLPKVLETAA RAQLQCTTLR AALAPEPAQA TRSQMTI
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