Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0280 |
Symbol | |
ID | 6287440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 295113 |
End bp | 295919 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642623850 |
Product | transposase IS4 family protein |
Protein accession | YP_001897873 |
Protein GI | 187927386 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGAAAC GCAGACCGTA TCCGAGCGAC GTGAGTGACG AAGAATGGAG CTTCGCGGCG CCGTATTTGA CGTTGATGAA CCAAGACGCG CCGCAGAGGC GATATGAATT GCGAGAGCTG TTCAACGCGC TGCGTTGGCT GGCACGCGCG GGGGCCGCAT GGCGCATGCT GCCGACGAAC TTTCCGCCCT GGGAGGCTGT GTACCAGCAG ACGCAACGCT GGCTGCGAGG GGGCTGTTTT GAGGCCATGG TTCAGGATTT GCGTTCGGTG CTGCGCGTGG CGCAAGGGCG GCAAGGTCAG CCGAGTGCAG TCATTCTCGA CGGGCGTACG CTGCAATCGA CGTGCGAGAG CGGTCCGCGC GCGGGTTACG ACGGCTACAA GCGCAAACGG GGAAGCAAGG TGCATATGGC CGTCGATACA CTCGGGCATT TGCTGGCAGT TCATATCACG CCGGCCAATG AACAAGAGCG CGCGCAAGTT CAGGTGTTGG CACGAGAGGT TCAGCTTGTG ACCGGGCAGA CTGTAAAGCT TGCTTTTGCC GACCAGGGTT ATACGGGCGA AGAACCAGCG CAAGCCGCGC GGGACGAAGG CATCGAATTG CAGGTCATCA AACTGCCAGA GGCGAAGAAA GGCTTTGTCC TGCTGCCACG CCGATGGGTC GTCGAGCGCA GTTTCGGATG GCTCAATCGG TTTCGAAGAC TCGCACGCGA CTACGAGCGC TTGCCTGAAA CACTCGCCGG CTTGCATTTC GTCGTCTTTG CCATGCTCAT GCTCGTTCAC GCCGCACCTG TCGTCCAAAG TGCATAA
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Protein sequence | MEKRRPYPSD VSDEEWSFAA PYLTLMNQDA PQRRYELREL FNALRWLARA GAAWRMLPTN FPPWEAVYQQ TQRWLRGGCF EAMVQDLRSV LRVAQGRQGQ PSAVILDGRT LQSTCESGPR AGYDGYKRKR GSKVHMAVDT LGHLLAVHIT PANEQERAQV QVLAREVQLV TGQTVKLAFA DQGYTGEEPA QAARDEGIEL QVIKLPEAKK GFVLLPRRWV VERSFGWLNR FRRLARDYER LPETLAGLHF VVFAMLMLVH AAPVVQSA
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