Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0237 |
Symbol | |
ID | 6289546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 251870 |
End bp | 253150 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642623807 |
Product | putative nitrate transporter protein |
Protein accession | YP_001897831 |
Protein GI | 187927344 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCGCGC CAGACAAGAC CGACGCTCTC GTCAACCCGA TCAACCCGAA GCGCCGCAGC ATCATGAAAG CCGCGGCGAC GATTGCAGGA GGCAGTGCCG TGGCATTGAT CGATCCGCTG GTGCGTGCCG GGGCCTGGGC CGCCGGCTCC GATGCGCCCG AGAAGACGGA ACTGAAGGTG GGTTTCATCC CGCTCACGGA CTGTGCTTCG GTGGTCATGG CATCCACGCT CGGCCTCGAC AAGAAGTACG GCATCAAGAT CACGCCGTCG AAAGAAGCCT CGTGGGCCGG CGTACGCGAC AAGCTCGTGT CGGGCGATCT GGATGCGGCG CACGTGCTGT ATGGCCTGAT CTACGGCGTG CAGCTCGGCA TTGGCGGCCC CAAGAAAGAC ATGGCCGTGC TGATGACGCT CAACAACAAC GGCCAGGCGA TCACGCTGTC GTCCAAGCTC AAGGAAGCGG GCGTCAAGGA TGGGGCGTCG TTGAAGGCCG TCATGGCGAA AGACAAGCGC GAATATGTGT TCGCGCAGAC CTTCCCGACC GGCACGCATG CGATGTGGCT GTACTACTGG CTGGCCGCGC ACGGCATCCA CCCGCTGCAG GACGCGAAGG CGATCACCGT GCCCCCGCCG CAGATGGTCG CGAACATGCG GGTGGGCAAC ATGGATGGCT ACTGCGTGGG CGAGCCGTGG GGTGCCCGCG CGATTGCAGA CAACATCGGC TTTACCGCCG AGACCACACA GGCCATCTGG AAAGACCACC CCGAGAAGGT GCTCGGCACC ACGGCGGAGT TCGTGCAGAA GTATCCGAAC ACCGCGCGTG CGCTCACGGC AGCGGTGCTG GAGGCAAGCA AGTTCATCGA TGCATCCGCA TCGAACCGCC GCAAGACGGC CGAGACCATT GCCGCCAAGT CCTACGTCAA CACCGACATG GACATCATTC TCGACCGCAT GCTCGGCCGC TATACGAATG GTCTGGGCAA GACGTGGGAC GACCCGGACC CGATGCGCTT CTATCACGAC GGCGCGGTCA ACTTTCCGTA CCTGTCGGAC GGCATGTGGT TCCTCACGCA GCACAAGCGC TGGGGCCTGC TGAAGGCGCA TCCGGATTAC CTGGCCGTGG CCAAGCAGGT CAACCGCGTG GACATCTTCA AGCAGGCGGC AACCGCCACC GGCACGCCGC TGCCCAAGAG CGACATGCGC ACGGCCAAGT TGATCGACGG CGTGGTGTGG GATGCGAAGA ACCCTGCCGC GTATGCGGAC GGCTTCAAGC TGAAAGCCTG A
|
Protein sequence | MAAPDKTDAL VNPINPKRRS IMKAAATIAG GSAVALIDPL VRAGAWAAGS DAPEKTELKV GFIPLTDCAS VVMASTLGLD KKYGIKITPS KEASWAGVRD KLVSGDLDAA HVLYGLIYGV QLGIGGPKKD MAVLMTLNNN GQAITLSSKL KEAGVKDGAS LKAVMAKDKR EYVFAQTFPT GTHAMWLYYW LAAHGIHPLQ DAKAITVPPP QMVANMRVGN MDGYCVGEPW GARAIADNIG FTAETTQAIW KDHPEKVLGT TAEFVQKYPN TARALTAAVL EASKFIDASA SNRRKTAETI AAKSYVNTDM DIILDRMLGR YTNGLGKTWD DPDPMRFYHD GAVNFPYLSD GMWFLTQHKR WGLLKAHPDY LAVAKQVNRV DIFKQAATAT GTPLPKSDMR TAKLIDGVVW DAKNPAAYAD GFKLKA
|
| |