Gene Rpic_0237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0237 
Symbol 
ID6289546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp251870 
End bp253150 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content64% 
IMG OID642623807 
Productputative nitrate transporter protein 
Protein accessionYP_001897831 
Protein GI187927344 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGCGC CAGACAAGAC CGACGCTCTC GTCAACCCGA TCAACCCGAA GCGCCGCAGC 
ATCATGAAAG CCGCGGCGAC GATTGCAGGA GGCAGTGCCG TGGCATTGAT CGATCCGCTG
GTGCGTGCCG GGGCCTGGGC CGCCGGCTCC GATGCGCCCG AGAAGACGGA ACTGAAGGTG
GGTTTCATCC CGCTCACGGA CTGTGCTTCG GTGGTCATGG CATCCACGCT CGGCCTCGAC
AAGAAGTACG GCATCAAGAT CACGCCGTCG AAAGAAGCCT CGTGGGCCGG CGTACGCGAC
AAGCTCGTGT CGGGCGATCT GGATGCGGCG CACGTGCTGT ATGGCCTGAT CTACGGCGTG
CAGCTCGGCA TTGGCGGCCC CAAGAAAGAC ATGGCCGTGC TGATGACGCT CAACAACAAC
GGCCAGGCGA TCACGCTGTC GTCCAAGCTC AAGGAAGCGG GCGTCAAGGA TGGGGCGTCG
TTGAAGGCCG TCATGGCGAA AGACAAGCGC GAATATGTGT TCGCGCAGAC CTTCCCGACC
GGCACGCATG CGATGTGGCT GTACTACTGG CTGGCCGCGC ACGGCATCCA CCCGCTGCAG
GACGCGAAGG CGATCACCGT GCCCCCGCCG CAGATGGTCG CGAACATGCG GGTGGGCAAC
ATGGATGGCT ACTGCGTGGG CGAGCCGTGG GGTGCCCGCG CGATTGCAGA CAACATCGGC
TTTACCGCCG AGACCACACA GGCCATCTGG AAAGACCACC CCGAGAAGGT GCTCGGCACC
ACGGCGGAGT TCGTGCAGAA GTATCCGAAC ACCGCGCGTG CGCTCACGGC AGCGGTGCTG
GAGGCAAGCA AGTTCATCGA TGCATCCGCA TCGAACCGCC GCAAGACGGC CGAGACCATT
GCCGCCAAGT CCTACGTCAA CACCGACATG GACATCATTC TCGACCGCAT GCTCGGCCGC
TATACGAATG GTCTGGGCAA GACGTGGGAC GACCCGGACC CGATGCGCTT CTATCACGAC
GGCGCGGTCA ACTTTCCGTA CCTGTCGGAC GGCATGTGGT TCCTCACGCA GCACAAGCGC
TGGGGCCTGC TGAAGGCGCA TCCGGATTAC CTGGCCGTGG CCAAGCAGGT CAACCGCGTG
GACATCTTCA AGCAGGCGGC AACCGCCACC GGCACGCCGC TGCCCAAGAG CGACATGCGC
ACGGCCAAGT TGATCGACGG CGTGGTGTGG GATGCGAAGA ACCCTGCCGC GTATGCGGAC
GGCTTCAAGC TGAAAGCCTG A
 
Protein sequence
MAAPDKTDAL VNPINPKRRS IMKAAATIAG GSAVALIDPL VRAGAWAAGS DAPEKTELKV 
GFIPLTDCAS VVMASTLGLD KKYGIKITPS KEASWAGVRD KLVSGDLDAA HVLYGLIYGV
QLGIGGPKKD MAVLMTLNNN GQAITLSSKL KEAGVKDGAS LKAVMAKDKR EYVFAQTFPT
GTHAMWLYYW LAAHGIHPLQ DAKAITVPPP QMVANMRVGN MDGYCVGEPW GARAIADNIG
FTAETTQAIW KDHPEKVLGT TAEFVQKYPN TARALTAAVL EASKFIDASA SNRRKTAETI
AAKSYVNTDM DIILDRMLGR YTNGLGKTWD DPDPMRFYHD GAVNFPYLSD GMWFLTQHKR
WGLLKAHPDY LAVAKQVNRV DIFKQAATAT GTPLPKSDMR TAKLIDGVVW DAKNPAAYAD
GFKLKA