Gene Rpic_0203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0203 
Symbol 
ID6287933 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp221520 
End bp221789 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content60% 
IMG OID642623774 
ProductPhosphotransferase system, phosphocarrier protein HPr 
Protein accessionYP_001897798 
Protein GI187927311 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1925] Phosphotransferase system, HPr-related proteins 
TIGRFAM ID[TIGR01003] Phosphotransferase System HPr (HPr) Family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.405136 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.268008 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCAGA GGGATATCAC CATCATCAAT AAGCTCGGGC TGCATGCGCG CGCCTCGGCC 
AAACTCACGC AGCTCGCCAG CAAGTTCGAT AGCCAGATCA AGATGTCGCG CAACGGTCGT
CAGGTCGACG CCAAGAGCAT CATGGGCGTG ATGATGCTGG CTGCGGGCAT TGGCTCCACC
GTCACGCTGG AGATCGACGG CCCGGACGAG CACGACGCCA TGGATGGTCT CGTCGCGCTC
ATCAACGATC GCTTTGGCGA AGGCGAATAA
 
Protein sequence
MLQRDITIIN KLGLHARASA KLTQLASKFD SQIKMSRNGR QVDAKSIMGV MMLAAGIGST 
VTLEIDGPDE HDAMDGLVAL INDRFGEGE