Gene Rpic_0169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0169 
Symbol 
ID6287279 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp186695 
End bp187573 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content64% 
IMG OID642623740 
ProductABC transporter related 
Protein accessionYP_001897764 
Protein GI187927277 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGGC CCCGCCATCC TCACATCAAG CACGCAGCGG AACCGGCGGC AATTACGCCC 
GCGCGCGAAC GCGTGATCGA GATGCGCAAC GTCACCAAGC GCTACGGCAA GGTGACCGTG
CTCGACAACA TCGATCTGGA CGTATTTCGC GGCGAGGTGC TTTCCATCGT GGGCGGTTCG
GGAAGCGGCA AGACGACATT GCTGCGCCAG GTGGTGGGGC TGGAGAAACC CTCCTCGGGC
ACGATCCACA TCTTTGGCGA AGAGCTGACC TGCCAGGTGG GCAACGATCT GCAGTCGATG
CGTAACCGCT GGGGCATGCA GTTCCAGCAC GGTGCGCTCT TCTCGGCGCT GTCCGTGATC
GACAACGTGG CATTGCCGAT GCGCGAATTG CGCACACTGC CCGACGCGTT CATCCAGCGC
GTGGCGATGC TCAAGCTGCA GATGGTGGGG CTCAAATCCA CCGATGCCGA CAAGATGCCG
TCGGACCTGT CGGGCGGCAT GATCAAGCGC GTGGCGCTCG CGCGGGCATT GTCGCTGGAG
CCGGAGCTGG TGTTTCTGGA CGAGCCGACC GCCGGGCTGG ACCCGCGCGC GTCGGACGAT
TACGTCGCGC TCATCCGCGA GTTGCGCCAG GAACTGGGCC TGACCGTGGT GATGGTGACG
CACGATCTCG ACACCCTGGT GGCGCTGTCC GACCGCATTG CGGTGCTGGC GGATCGCAAG
GTGGTGGCGG CCAAGCCGCT GGACCAGATC ATTCAGATTG ATCATCCGTT CATCAAGGAG
TATTTCCTGG GTGAGCGGGG CAAACGGGCC CTGTTGGCGC TGGGCTCGCA GATGACGGAG
GCGGTGGCTG CAGCCTCGCT TTCGACGCAG GAGGATTGA
 
Protein sequence
MTRPRHPHIK HAAEPAAITP ARERVIEMRN VTKRYGKVTV LDNIDLDVFR GEVLSIVGGS 
GSGKTTLLRQ VVGLEKPSSG TIHIFGEELT CQVGNDLQSM RNRWGMQFQH GALFSALSVI
DNVALPMREL RTLPDAFIQR VAMLKLQMVG LKSTDADKMP SDLSGGMIKR VALARALSLE
PELVFLDEPT AGLDPRASDD YVALIRELRQ ELGLTVVMVT HDLDTLVALS DRIAVLADRK
VVAAKPLDQI IQIDHPFIKE YFLGERGKRA LLALGSQMTE AVAAASLSTQ ED