Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0169 |
Symbol | |
ID | 6287279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 186695 |
End bp | 187573 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642623740 |
Product | ABC transporter related |
Protein accession | YP_001897764 |
Protein GI | 187927277 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCGGC CCCGCCATCC TCACATCAAG CACGCAGCGG AACCGGCGGC AATTACGCCC GCGCGCGAAC GCGTGATCGA GATGCGCAAC GTCACCAAGC GCTACGGCAA GGTGACCGTG CTCGACAACA TCGATCTGGA CGTATTTCGC GGCGAGGTGC TTTCCATCGT GGGCGGTTCG GGAAGCGGCA AGACGACATT GCTGCGCCAG GTGGTGGGGC TGGAGAAACC CTCCTCGGGC ACGATCCACA TCTTTGGCGA AGAGCTGACC TGCCAGGTGG GCAACGATCT GCAGTCGATG CGTAACCGCT GGGGCATGCA GTTCCAGCAC GGTGCGCTCT TCTCGGCGCT GTCCGTGATC GACAACGTGG CATTGCCGAT GCGCGAATTG CGCACACTGC CCGACGCGTT CATCCAGCGC GTGGCGATGC TCAAGCTGCA GATGGTGGGG CTCAAATCCA CCGATGCCGA CAAGATGCCG TCGGACCTGT CGGGCGGCAT GATCAAGCGC GTGGCGCTCG CGCGGGCATT GTCGCTGGAG CCGGAGCTGG TGTTTCTGGA CGAGCCGACC GCCGGGCTGG ACCCGCGCGC GTCGGACGAT TACGTCGCGC TCATCCGCGA GTTGCGCCAG GAACTGGGCC TGACCGTGGT GATGGTGACG CACGATCTCG ACACCCTGGT GGCGCTGTCC GACCGCATTG CGGTGCTGGC GGATCGCAAG GTGGTGGCGG CCAAGCCGCT GGACCAGATC ATTCAGATTG ATCATCCGTT CATCAAGGAG TATTTCCTGG GTGAGCGGGG CAAACGGGCC CTGTTGGCGC TGGGCTCGCA GATGACGGAG GCGGTGGCTG CAGCCTCGCT TTCGACGCAG GAGGATTGA
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Protein sequence | MTRPRHPHIK HAAEPAAITP ARERVIEMRN VTKRYGKVTV LDNIDLDVFR GEVLSIVGGS GSGKTTLLRQ VVGLEKPSSG TIHIFGEELT CQVGNDLQSM RNRWGMQFQH GALFSALSVI DNVALPMREL RTLPDAFIQR VAMLKLQMVG LKSTDADKMP SDLSGGMIKR VALARALSLE PELVFLDEPT AGLDPRASDD YVALIRELRQ ELGLTVVMVT HDLDTLVALS DRIAVLADRK VVAAKPLDQI IQIDHPFIKE YFLGERGKRA LLALGSQMTE AVAAASLSTQ ED
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