Gene Rpic_0133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0133 
Symbol 
ID6289024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp153445 
End bp154290 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content63% 
IMG OID642623704 
Producthypothetical protein 
Protein accessionYP_001897728 
Protein GI187927241 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.76466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTACA CCGATGCGGC TGGGCTCGCC CACGCCCCTG TCGACACCAC ACCGCGCATC 
GCCAGCCTGG TCCCTTCGAT TACCGATCTG CTGTTCTCGC TCGACCTGGG CGATCAGCTT
GTGGCCCGCA CCGGCTTCTG CATCCACCCG CGCGAAGCGG TGCGCAACGT ACCGAAGGTC
GGTGGCACCA AGACCGTCAA ACTGGACAAG TTGCGCGAGC TGGCGCCCAC GCACGTCATC
GTGAACATTG ACGAGAACAC GCGTCCGACC GTCGACAAGC TGCGCGAGTT CATCCCGCAC
ATCATCGTCA CGCATCCTTG CTCGCCGGAA GACAACCTCG CGCTATACGA ACTGCTGGGC
GGTATCTTTC GCCGCGAAGC GCAGGCGCAG AAGTTGTCGG ATGCGCTGAC GCAGGAGCTG
GAGGCGCTGC GCGGTCGCCA CTTCCTGCCG CACCGCGTGC TGTACGCCAT CTGGCAAGAC
CCGTGGATGA CCGTGTCGCG CGACACGTAC ATCTCGCGGA TGCTCAAACT CGTCAACTGC
CATACGTGGC CCGACGATCC GGCGCCTGTG GAATGCGGCA CCAACAAGAG CGGCGATTGT
GCCCGCCCCA ACCGGCCCGA CACGCGCTAC CCGACGTTCC GCTGGAGCAA TGATGTTGTG
CGCAACATCG ACTGCGTGCT GCTCTCCACC GAGCCTTACA GCTTTACCGA AGAGCACGTC
GATGCGCTCG AAAAGCAGAT CGGCAAGCCG GTCTACCTCG TTGATGGCGA GATGGTGTCG
TGGTACGGCA GCCGCGCGAT TGATGGCGTG CGGTATCTGG GGCAATTTGC GAAGACGCTG
CGTTAG
 
Protein sequence
MTYTDAAGLA HAPVDTTPRI ASLVPSITDL LFSLDLGDQL VARTGFCIHP REAVRNVPKV 
GGTKTVKLDK LRELAPTHVI VNIDENTRPT VDKLREFIPH IIVTHPCSPE DNLALYELLG
GIFRREAQAQ KLSDALTQEL EALRGRHFLP HRVLYAIWQD PWMTVSRDTY ISRMLKLVNC
HTWPDDPAPV ECGTNKSGDC ARPNRPDTRY PTFRWSNDVV RNIDCVLLST EPYSFTEEHV
DALEKQIGKP VYLVDGEMVS WYGSRAIDGV RYLGQFAKTL R