Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0116 |
Symbol | |
ID | 6288015 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 134385 |
End bp | 136409 |
Gene Length | 2025 bp |
Protein Length | 674 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642623687 |
Product | Carbamoyl-phosphate synthase L chain ATP-binding |
Protein accession | YP_001897711 |
Protein GI | 187927224 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCACCA AGCTCCTCAT CGCCAACCGA GGCGAAATCG CCTGCCGGGT CGCCGCCACC TGCCGCAAGC TCGGCATCCG CACGGTCGCG GTCTACTCCG ATGCCGACGC CAACGCCCGC CACGTCGCGG CCTGCGACGA AGCCATCCAC ATCGGTGAGC CCGCCGCCCG CGACAGCTAC CTCCGCGCTG ATCGCATCCT CGAAGCCGCA CGCGCCACGG GCGCGCAAGC CGTCCATCCC GGCTACGGCT TCCTCTCAGA GAACGAAGCT TTCGCAAAAG CCTGCGCAGA CGCCGGCATC ATCTTCGTCG GCCCGCCGGC CTCGGCCATC GAAGCGATGG GCAGCAAGAG CGCGGCCAAG GCGCTGATGG AAACGGCGGG CGTGCCGCTC GTGCCCGGCT ACCACGGCGA CAACCAGGAC GCGGCCTTCC TGCGCACGCA AGCCGATCGC ATCGGCTACC CCGTGCTCAT CAAGGCCAGC GCCGGCGGCG GGGGCAAGGG CATGCGCGTG GTGGAGTCAG GCGATGCGTT CGAAGCCTCG CTGGCTTCCG TCAAGCGCGA GGCGTCTTCC AGCTTCGGTG ACGACCGCGT ACTGATCGAG AAGTACCTCA CGCGTCCGCG CCACATTGAA ATCCAGGTGT TTGCCGACAG CTTCGGCGAC GCTGTCTATC TGTTCGAGCG CGACTGCTCT GTGCAGCGCC GCCACCAGAA GGTGCTGGAA GAAGCCCCCG CCCCGGGCAT GACGCTGGAC CGCCGCCGCG CGATGGGCGA AGCGGCCGTG GCGGCCGCGC GCGCCGTGGG CTACGTGGGC GCCGGCACGG TCGAGTTCAT CGTCGACGAA GACGGCACGT TCTACTTCAT GGAGATGAAC ACGCGCCTGC AGGTCGAGCA CCCCGTGACC GAAATGATCA CGGGCGAGGA CCTCGTCGAA TGGCAATTGC GCGTGGCATC CGGCGAGCCG CTACCACGCA CGCAGGACGA GCTGCACATC CACGGCCATG CGCTCGAAGC ACGCATCTAC GCCGAAAACC CCGACCGCGA TTTCCTGCCC TCCATCGGCA CGCTGAAGGT GCTGCGCACA CCAGCGGCGG TGGAGTTCAC CGTAGGCGCG CAAGCCAATG GCGAACCGGC TGCCGTGCGC ATCGATGCCG GCGTGCGTGA AGGCGACGCC ATCAGCCCGT ACTACGATCC GATGATCGCC AAGCTCATCG TCTGGGGCCG TGACCGTGAA GAAGCGCTCG CGCGCATGCT GCAGGCGCTG GGCAGCTTCC ACCTGGTGGG GCTGTCGTCC AACGTGGCTT TCCTGCGCCG CCTGGTCGCA TCGAAGCCAT TTGCGACCGC CGATCTGGAT ACCGGCCTGA TCGCCCGCAA TCACGACACG CTGTTCCCCG CTGCACCGGA CGTGCCGCTA GACGCCATCG CCCTGGCCGT GGCTGCGCTG CTCGCCCGCG AGGCACGCAG CCTGCGCACC GACACGCGCG ATCCGCATTC GCCGTGGGCG CGCGGCAGCG GCTGGCGCCT GAACGGCGCG GCTGAGCGCA CGCTGCGTTT CACGCATGGC GATCAGTCCA TCGATGCCAC GCTCATCTAC GGCCGCTACG GCTCGCGACT GAAAGTTGGC GGCAGCGAAG CGCCCTTCAC CTCACAGCGC CATGCAGAGA CCTTCACCGT CACGCTCGGC ACGCACAAGG CGACCGGCCA GGTGCATGCC GATGGCGACA CGTTCCACGT CTTCACCGGC GGTGCGCACT GGACGCTGGA GCGCCACGAC CCGCTCGCCC ATGCCGGCGA GGCCGACGAC GAAGGCGGCA AGCTGACGGC GCCGATGCCC GGCAAGGTCA TCGCCGTGCT GGCCGCCCCG GGGCAAACCG TCACCAAGGG CGCACCGCTG GTCGTCATGG AGGCCATGAA GATGGAGCAC ACGCTCACGG CACCTGCCAA CGGCGTCGTC GAATCCGTGC TGTACGGCGT GGGCGATCAG GTGACGGAAG GCGTGCAGTT GCTGGCGTTC AAGCCCGCCG AATGA
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Protein sequence | MITKLLIANR GEIACRVAAT CRKLGIRTVA VYSDADANAR HVAACDEAIH IGEPAARDSY LRADRILEAA RATGAQAVHP GYGFLSENEA FAKACADAGI IFVGPPASAI EAMGSKSAAK ALMETAGVPL VPGYHGDNQD AAFLRTQADR IGYPVLIKAS AGGGGKGMRV VESGDAFEAS LASVKREASS SFGDDRVLIE KYLTRPRHIE IQVFADSFGD AVYLFERDCS VQRRHQKVLE EAPAPGMTLD RRRAMGEAAV AAARAVGYVG AGTVEFIVDE DGTFYFMEMN TRLQVEHPVT EMITGEDLVE WQLRVASGEP LPRTQDELHI HGHALEARIY AENPDRDFLP SIGTLKVLRT PAAVEFTVGA QANGEPAAVR IDAGVREGDA ISPYYDPMIA KLIVWGRDRE EALARMLQAL GSFHLVGLSS NVAFLRRLVA SKPFATADLD TGLIARNHDT LFPAAPDVPL DAIALAVAAL LAREARSLRT DTRDPHSPWA RGSGWRLNGA AERTLRFTHG DQSIDATLIY GRYGSRLKVG GSEAPFTSQR HAETFTVTLG THKATGQVHA DGDTFHVFTG GAHWTLERHD PLAHAGEADD EGGKLTAPMP GKVIAVLAAP GQTVTKGAPL VVMEAMKMEH TLTAPANGVV ESVLYGVGDQ VTEGVQLLAF KPAE
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