Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0057 |
Symbol | |
ID | 6289194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 69251 |
End bp | 70414 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642623630 |
Product | ABC-2 type transporter |
Protein accession | YP_001897654 |
Protein GI | 187927167 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | [TIGR00025] ABC transporter efflux protein, DrrB family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCAG AGGGCAATCG GTTTTCGCTT GTGCGCTGGT GGAGCGTGGT GCTCAAGGAG TTTCTGCAAC TTCGCCGCGA CCGCGTGACG TTCGCGATGA TGATCGGCAT TCCGATCATG CAGCTGATCC TGTTCGGTTT TGCCATCAAC GCCGACCCGA GGCACCTGCT GACCGGCGTA ATCGCCGCCG ACCAGAGCGA GTTCACGCGC AGCTTCCTGG CCAGCATGCG CAACTCCGAC TACTTCGACC TGGCGACCAC GCTGACAGAC GAAACCGCCG GGCGCGAGGC GTTGTCCAAG GGGCAGCTTC AGTTTGTCGT ATCGATCCCG CCGGACTTCA CGCGCAAGCT CGTACGCGGC GAGAAACCCT CGCTGCTCGT GGAGGCCGAT GCCACCGACC CTGCCGCTAC CGGCCTCGCC GTGGCCTCGC TCTCGCAACT GGTGCAGGGC GTCGTCAGCA AGGATATGAA GGGCGCGCTG TCGTCGCTGG CTGGAGGTGC TGGCACCAAC GGTGCGGCGC CGCCATTCGA TGTGCGCATC CACAAGCTGT ACAACCCGGA AGGCATCACG CAATACAACA TCATCCCCGG CCTGATGGGC ACCATCCTGA CGATGACCAT GGTGATGATG ACGGGCCTGG CCATGACGCG CGAGCGCGAG CGCGGCACGA TGGAAAACCT GCTCGCCACG CCGGTGCATC CGCTGGAGGT GATGACGGGC AAGATCGTGC CGTACATCTC CATCGGGCTG GTGCAGGTGA CCATCATCCT GCTGATGGCG TTCTTCGTTT TCCACGTGCC GTTCGTCGGC AGTGTGTGGA TGGTCTACGT GTCGGCGCTG CTGTTTATCG TGGCGAGCCT GACGGTGGGG ATTACGTTGT CGTCGCTGGC GCAGAACCAG CTGCAGGCGA CGCAGCTGAC CTTCTTCTAC TTCCTGCCGA ACATCCTGCT CTCGGGCTTC ATGTTCCCGT TCGTGGGCAT GCCGAAGTGG GCGCAGGTGA TCGGCAACCT GCTGCCGATG ACGTACTTCA ACCGGCTCAC GCGCGGCATC CTGCTCAAGG GCAATGGCTG GTTCGAGCTG TGGCCGAGCA TCTGGCCGTT GATGGTGTTT ACGGTGGTGG TGCTGGGGGT GGCGTTGCGG TTTTATCGCA AGACGTTGGA TTGA
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Protein sequence | MKPEGNRFSL VRWWSVVLKE FLQLRRDRVT FAMMIGIPIM QLILFGFAIN ADPRHLLTGV IAADQSEFTR SFLASMRNSD YFDLATTLTD ETAGREALSK GQLQFVVSIP PDFTRKLVRG EKPSLLVEAD ATDPAATGLA VASLSQLVQG VVSKDMKGAL SSLAGGAGTN GAAPPFDVRI HKLYNPEGIT QYNIIPGLMG TILTMTMVMM TGLAMTRERE RGTMENLLAT PVHPLEVMTG KIVPYISIGL VQVTIILLMA FFVFHVPFVG SVWMVYVSAL LFIVASLTVG ITLSSLAQNQ LQATQLTFFY FLPNILLSGF MFPFVGMPKW AQVIGNLLPM TYFNRLTRGI LLKGNGWFEL WPSIWPLMVF TVVVLGVALR FYRKTLD
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