Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0023 |
Symbol | |
ID | 6287371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 34060 |
End bp | 34758 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642623596 |
Product | transcriptional regulator, Crp/Fnr family |
Protein accession | YP_001897620 |
Protein GI | 187927133 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.781949 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACAC CCCGTGCTCC GACGCCCGCC ACGCAACTGC AAGGCCATGC GTGGTACACC GCGCTGGCGC CTGAACACCA GGCCCTGGCC GGGCGAGAAA CCCTGCTGCA GGCCTTCGAG CCCGGTGCCT TCATTGCCCG CCGCGGCGAA CCGTCCCGCT ACTGGATCGG CGTGGACACC GGGCTCATCA AGCTGGCCGT GTACACCTCC GACGGGCGCG GCTGCACGTT CTCCGGCGTG CCTGCGGGCG GCTGGTGCGG CGAGGGCAGC GTCATCAAGC GCGAAGACCG CCGCTATGAC GTGATCGCCA TTCGCGCCTC GCACGTGCTG CTGGTGCCCG AACCCGTGTT CAATACGCTG CTCGCGCAGA GCTTGCCGTT TGCCAGCTTT GTGGTGCGCC AGCTCAACGA ACGCATGGGT CAGTTCATTG CCACCGTGCA GAACGACCGC CTGCTGAGCG CCGATGCGCG CGTGGCGCAA GCGATTGCGC AGCTGTTCCA CCCTGCCCTG TACCCGCGCA CGAGCACCGT GCTGGAGCTG TCACAAGAAG AGATCGGGCT GCTGACGGGG CTGTCGCGCC AGCGCGTGAA CCGCGCGCTG CAACGGCTGG CCGAAGGCGG AATGATCGCG CTGTCATACC AGACCATTCG CGTGACCGAC CTCGAGCGGC TGCGGCTCTT CGGCCTGTCG GAGCTGTAA
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Protein sequence | MTTPRAPTPA TQLQGHAWYT ALAPEHQALA GRETLLQAFE PGAFIARRGE PSRYWIGVDT GLIKLAVYTS DGRGCTFSGV PAGGWCGEGS VIKREDRRYD VIAIRASHVL LVPEPVFNTL LAQSLPFASF VVRQLNERMG QFIATVQNDR LLSADARVAQ AIAQLFHPAL YPRTSTVLEL SQEEIGLLTG LSRQRVNRAL QRLAEGGMIA LSYQTIRVTD LERLRLFGLS EL
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