| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0008 |
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| Symbol | |
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| ID | 6288119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 10906 |
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| End bp | 11763 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642623583 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_001897607 |
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| Protein GI | 187927120 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2801] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.230626 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGCAGG TTGCCTCGTC GGCCTATCGG CGCCATGCCG CACGGCTGCG TGATCCGTCA
CGGCGCAGCG ACCGTGCGCG TCGTGATGAA CGGCTCATGC CGCAAGTCCA GCGAGTGTGG
CAGGAGAACC ATCGCGTCTA CGGCGCCGAC AAGGTCTGGC GGCAACTGAA CCGCGAGGGC
GTGACGGTTG CCCGCTGCAC GGTCGAGCGA TTGATGCGCG CCCAGGGACT GCAAGGTGTG
CGGCGCGGCA AGCGGCTGCG AACGACCATC GCTGACGACG CCGCCAGTCG CCCGGTGGAT
CGCGTCAACC GGCAGTTCCG GGCCGACCGT CCCAATCAGC TCTGGGTCTC GGACTTCACC
TACGTCTCGA CATGGCAGGG TTGGCTGTAC GTGGCCTTCG TCGTCGACGT CTACGCCAGG
CGCATCGTCG GCTGGCGCGT GAGCAAATCC ATGACGACGG ACTTCGTGCT CGATGCGCTG
GAGCAGGCCC TATACGCTCG CCAGCCTGGC AACGACGGTT CTCTGACCCA CCACTCCGAT
AGGGGATCGC AGTACGTCAG CATCCGCTAT AGCGAACGCC TGGCCGAAGC CGGCATCGAG
CCGTCGGTCG GCAGCCGTGG CGACAGTTAC GACAACGCCT TGGCCGAGAC GATCAATGGC
TTGTACAAGG CCGAGCTGAT CCATCGCCGC GCGCCTTGGA AAACCAGGGA ATCCGTCGAA
CTGGCAACAC TGGAATGGGT CGCTTGGTTC AACCATAAGC GCCTGCACTC ATCCATCGGC
TATATCCCGC CCGCCGAGGC TGAGGCAAAC TACTACAACC AACTCGGCAA AACCGCCGAC
GAGGCCGTTT TACTTTAA
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| Protein sequence | MLQVASSAYR RHAARLRDPS RRSDRARRDE RLMPQVQRVW QENHRVYGAD KVWRQLNREG
VTVARCTVER LMRAQGLQGV RRGKRLRTTI ADDAASRPVD RVNRQFRADR PNQLWVSDFT
YVSTWQGWLY VAFVVDVYAR RIVGWRVSKS MTTDFVLDAL EQALYARQPG NDGSLTHHSD
RGSQYVSIRY SERLAEAGIE PSVGSRGDSY DNALAETING LYKAELIHRR APWKTRESVE
LATLEWVAWF NHKRLHSSIG YIPPAEAEAN YYNQLGKTAD EAVLL
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