Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0003 |
Symbol | gyrB |
ID | 6286481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 3438 |
End bp | 5966 |
Gene Length | 2529 bp |
Protein Length | 842 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642623578 |
Product | DNA gyrase subunit B |
Protein accession | YP_001897602 |
Protein GI | 187927115 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAG AGCAGAAACC GCAATCCACC CCCGCCGAGG CCAACAGCTA TGACGCCGCC TCGATCCAGA TCCTGGAAGG CCTGGAGGCG GTACGCAAGC GGCCGGGCAT GTACATCGGC GACACCTCGG ATGGCACCGG CCTGCACCAC CTCGTGTTCG AGGTGCTGGA CAATTCCATC GACGAAGCAC TGGCCGGGCA TTGCACCGAG ATCCAGGTCA CCATCCACAC GGACAACTCC ATCTCCGTGA TCGACAACGG CCGTGGCATC CCGACCGGCA TCAAGTTTGA CGACAAACAC GAGCCCAAGC GCAGCGCGAC CGAGATCGCC ATGACCGAGC TGCACGCCGG TGGCAAGTTC AACCAGAACA GCTACAAGGT GTCGGGCGGC CTGCACGGCG TGGGCGTGTC GTGCGTGAAC GGTCTGTCGA AGTGGATGAA GGTGACGGTG CGCCAGGGTG GCAAGGTGCA TTACATCGAG TTTGCACAGG GCGTTCCGCA AAACCGCCTG ATCGAAACGG TGCAAGGGCC GGACGGTCAG ATGGTGGAGG TCTCGCCGCT GCGCGTGTTG GGCACCACCG ACAAGCGCGG CACCGAAGTG CACTTCCTGG CCGACGAAGA GATCTTCACC AACGTCGAAT ACCACTACGA GATCCTCTCC AAGCGCATTC GCGAGCTTTC GTTCCTGAAC AACGGCGTGC ACATCCGGCT GACCGATCAG CGCACCGGCA AGGAAGAAGA CTTCGCCTTC TCGGGCGGCG TGAAGGGCTT CGTTGAGTAC ATCAACAAGA ACAAGACCGT GCTGCACCCC ACCATCTTCT TTGCCGCAGG CGAGAAAGAC GGCGTGGCCG TGGAAGTGTC AATGCAGTGG AACGACGCCT ACAACGAACA GGTGCTCTGC TTCACCAACA ACATCCCGCA GCGTGACGGC GGCACCCACC TCACGGGCCT GCGCGCCGCC ATGACGCGCG TCATCAACAA GTACATCGCC GACAACGAGA TCGCCAAGAA AGCCAAGGTC GACACCTCGG GCGACGACAT GCGCGAAGGC CTGACCTGCG TGCTGTCCGT CAAGGTGCCC GAGCCCAAGT TCAGCTCGCA GACCAAGGAC AAGCTCGTCT CGTCGGAAGT GCGCCTGCCG GTGGAAGAAG TCGTCGCCAA GGCGCTGAGC GACTTCCTGC TGGAAACGCC CGTCGACGCC AAGATCATCT GCGGCAAGAT CGTTGAAGCT GCCCGCGCGC GTGAAGCCGC CCGCAAGGCC CGCGAAATGA CGCGCCGCAA AGGCGTGCTC GACGGCATGG GCCTGCCCGG CAAGCTGGCC GACTGCCAGG AGAAAGACCC CGCGCTGTCT GAACTCTTCA TCGTCGAGGG TGACTCCGCA GGCGGATCGG CCAAGCAGGG CCGCGACCGC AAGTTCCAGG CAATCCTGCC GCTCAAGGGC AAGATCCTGA ACGTCGAGCG CGCGCGCTTT GACAAGATGC TCTCCAGCCA GGAAGTGCTC ACGCTCATCA CCGCCATGGG CACCGGCATT GGCAAAGACG ACTACAACCT CGACAAGCTG CGCTACCACC GCATCATCAT CATGACCGAT GCTGACGTGG ACGGCTCGCA CATCCGCACG CTGCTGCTCA CGTTCTTCTA CCGCCAGATG CCCGAGATCA TCGAGCGCGG CCACGTGTAC ATCGCCCAGC CGCCGCTCTA CAAGATCAAG CACGGCAAGG AAGAGCGCTA CATCAAAGAC GATGTCGAGA TGGCCGCCTA CCTCGTGCGC CAGGCGCTGG ACACCGCCGT GCTCGTGCGC CCCGACGGCA CCGAGATTGC CGGCGACGCC CTGGCCGAAC TCGCACGCCA GTACCAGCTC AGCCGCGGCG TGATCGAGCG CCTGTCTCGC GTGATTGACG CCGACGCCCT GCGCGCCATT GCCGAAGGCG TGTCGCTGGA CTTGTCCAAC GAAGCCGCAG CCGAAGCCAG CGCCCGCACG CTCAAGGCCC GCCTGCTGGA AATGCAAGGC AACGCCAGCA GCGCCAACGG CGGCGCCACC GCAGACGCCT TCATGCAGTA CGACGAGAAG ACCGAGAAGT ACCGCATCAT GGTCGTCCGC CGCCAGCACG GCAACCAGCG CCTCAGCCAC ATCGACGCCG ACTTTGTGGC CGGCGCCGAC TACACCGCGC TCTCAAGCAC CGCCGCCACC TTCCAGGGCC TGATTGGCGA CGGCGCCAAG GTGCGCCGCG GCACCGGCGA CAAGGTGCGC GAGCAGAACG TTGCCGACTT CCACGCCGCC ATGACCTGGC TGCTGAGCGA GGCCGAGCGC GGCGTGAGCC GCCAGCGCTA CAAGGGCCTG GGCGAAATGA ACCCCGAGCA GCTGTGGGAA ACCACCATGG ACGTCACCCA GCGCCGCCTG CTGCGCGTGC AGATTGAAGA CGCCATTGCC GCGGACCAGA TCTTCACCAC GCTGATGGGC GACGACGTGG AACCGCGCCG GAACTTCATT GAGAGCAATG CGTTGGTGGC GCGGAATATT GATGTTTGA
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Protein sequence | MTEEQKPQST PAEANSYDAA SIQILEGLEA VRKRPGMYIG DTSDGTGLHH LVFEVLDNSI DEALAGHCTE IQVTIHTDNS ISVIDNGRGI PTGIKFDDKH EPKRSATEIA MTELHAGGKF NQNSYKVSGG LHGVGVSCVN GLSKWMKVTV RQGGKVHYIE FAQGVPQNRL IETVQGPDGQ MVEVSPLRVL GTTDKRGTEV HFLADEEIFT NVEYHYEILS KRIRELSFLN NGVHIRLTDQ RTGKEEDFAF SGGVKGFVEY INKNKTVLHP TIFFAAGEKD GVAVEVSMQW NDAYNEQVLC FTNNIPQRDG GTHLTGLRAA MTRVINKYIA DNEIAKKAKV DTSGDDMREG LTCVLSVKVP EPKFSSQTKD KLVSSEVRLP VEEVVAKALS DFLLETPVDA KIICGKIVEA ARAREAARKA REMTRRKGVL DGMGLPGKLA DCQEKDPALS ELFIVEGDSA GGSAKQGRDR KFQAILPLKG KILNVERARF DKMLSSQEVL TLITAMGTGI GKDDYNLDKL RYHRIIIMTD ADVDGSHIRT LLLTFFYRQM PEIIERGHVY IAQPPLYKIK HGKEERYIKD DVEMAAYLVR QALDTAVLVR PDGTEIAGDA LAELARQYQL SRGVIERLSR VIDADALRAI AEGVSLDLSN EAAAEASART LKARLLEMQG NASSANGGAT ADAFMQYDEK TEKYRIMVVR RQHGNQRLSH IDADFVAGAD YTALSSTAAT FQGLIGDGAK VRRGTGDKVR EQNVADFHAA MTWLLSEAER GVSRQRYKGL GEMNPEQLWE TTMDVTQRRL LRVQIEDAIA ADQIFTTLMG DDVEPRRNFI ESNALVARNI DV
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