Gene Rpic12D_5424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5424 
Symbol 
ID8015996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012851 
Strand
Start bp30569 
End bp30961 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content61% 
IMG OID644827255 
Productsingle-strand binding protein 
Protein accessionYP_002978455 
Protein GI241258189 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATCCG TCAACAAAGT CATCATCGTC GGCAATCTCG GCGCCGATCC CGAAACGCGC 
TACATGCCCA GCGGTGATGC CGTCACCAAC ATCCGCGTGG CGACCACCGA CCGCTACAAG
GACAAGGCCA GCGGCGAGAT GAAGGAAACC ACCGAGTGGC ACCGCATCGC CTTCTTCGGT
CGACTGGCCG AGATCGCCGG CGAATACCTG AAGAAGGGCT CGCAGGTCTA CATCGAAGGC
CGCCTCAAGA CTCGCCAGTG GGAGAAGGAC GGCCAGAAGC AATACAGCAC CGAAATCGTC
GCAGACCAAC TGCAGATGCT TGGCAAGGCG CCCGGCGATC GTGGCACGGC AGGCGCTAAC
GATTTCGAGA GCGAAGACGA GATTCCGCTG TGA
 
Protein sequence
MASVNKVIIV GNLGADPETR YMPSGDAVTN IRVATTDRYK DKASGEMKET TEWHRIAFFG 
RLAEIAGEYL KKGSQVYIEG RLKTRQWEKD GQKQYSTEIV ADQLQMLGKA PGDRGTAGAN
DFESEDEIPL