Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_5415 |
Symbol | |
ID | 8015987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012851 |
Strand | - |
Start bp | 22862 |
End bp | 23878 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644827246 |
Product | TrbL/VirB6 plasmid conjugal transfer protein |
Protein accession | YP_002978446 |
Protein GI | 241258180 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGACA TCCTCAGCAC AATCAACCAA CTGTTCGCCG CCGTACAAAG TGCGGGCTCA TCTCTCGAAA ACCTCTTTGT TTCTGACGGC ATCGACTTGC TTGCGGCGCT TGGATTGATC GTCGCGACCT GGCACACCTT GCTGTGGCTG CTCGATGGTG ATTTTCCGAA CTACTTCTCG ATGATGTTGC GCCACGTCGT CAAGGTCGCG GTACTCCTCC TGATCCTCAC CACCTGGTCA GGCACGGTGC ACAGCTACTT CGTGAGCAAC ATGCAAACCA TGGCCGATCG CGTCGCCGGT GGCAGTGCCG ACTCGAATAC GCTCGCCAAC ACCCTGGTCG GCGCCATCCA GACGGTCATG TCCGGCACGC GCACCCAATC GCACACAGTC TGTACCGATG TCCCGGATTA CACGCTGGAC GGCGGCATTC CTACTGGCAC CAGCCACCAG GATTGTCATG ACGTCAACGA CAACGCATTG GACAACACCA GTTTCTGGAC AGCCTTCAAA ACGTTGCCAG TTGTGCTGCT CACGCTTCTC GCAAAGGCCA TCGCTCTGAT CGCCATGGTG CTCTGCGTGC TGATCTTCGT TGTGGTCGTG CAAATGGGCT CGATCCTGCT TCACATCGCC TTTTGCCTTG GTCCCATTCT TGTGCCCTGG TTCGTCTTCC CGCCAACGGA ATTTCTCTTC GAGAACTGGT TGAGAGCCGT CATTGGCGCA GGCCTCTACA AGGTCATCGC CTGGATCATG ATGGGCCTCG TCATGAAGGG CGTTGTGCCT GGCTTCAATG CCTTGCTGCA GAAGGTCGCC GCGACCAACG GCGTCGGCAG CGAGATCTAC TACAACACGG CCTATCTGGC CCTGATCGCC CTCGCCCTCG TCGCCTCGAT CGGCGCGTTC TTGATGTGGC AGGTCCCGGC AATCGCCAGC ACGTACGCCG GCGGCGGCGG AGCTTCGCTC AAGGGCTTTG GCAAAGGCGC TATTTCGAAG ATGGCACAAG GTAACGGAGC ATCCTGA
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Protein sequence | MDDILSTINQ LFAAVQSAGS SLENLFVSDG IDLLAALGLI VATWHTLLWL LDGDFPNYFS MMLRHVVKVA VLLLILTTWS GTVHSYFVSN MQTMADRVAG GSADSNTLAN TLVGAIQTVM SGTRTQSHTV CTDVPDYTLD GGIPTGTSHQ DCHDVNDNAL DNTSFWTAFK TLPVVLLTLL AKAIALIAMV LCVLIFVVVV QMGSILLHIA FCLGPILVPW FVFPPTEFLF ENWLRAVIGA GLYKVIAWIM MGLVMKGVVP GFNALLQKVA ATNGVGSEIY YNTAYLALIA LALVASIGAF LMWQVPAIAS TYAGGGGASL KGFGKGAISK MAQGNGAS
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