Gene Rpic12D_5393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5393 
Symbol 
ID8015965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012851 
Strand- 
Start bp5153 
End bp5881 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content63% 
IMG OID644827225 
Producthypothetical protein 
Protein accessionYP_002978425 
Protein GI241258159 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.962433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCCGA CAACTTTTTT GGTCATCCGA TACAAGACGC TCCTAATGCA ACGCCTGTTG 
GATTCTGTCC GGCATGGCTA TTGCCATTAC ACGGCCGCAC AAGTTCCGGC CGAGAAGGCA 
TTGGCGTTCT GCCAAAAGTT CGCGGAACGC TATGAGGTCG CGCTGAACCG CGACCAACGC 
GCCTACCGCA AGCGGCTTGG CAAGGGCAAT GCCCGGCTGA TCCTTGCCGA CCTGGCCAAG 
AACGGGACCC TGCACTGGTT CTTGCTCGTG TCCGATGGTG ACCACCCGGC CAGGCAGATG 
GAGCCGCTAC GCGATGCGCT GGAGTCGTCC ACGCGCATCC GCGTGGACGA CTACGAACTC 
CTGCGGCTGC CACGCGATCG GAATCATGGC GGCGGCGTCC GCCTGACTTG GCGGATGACC 
AACCAGCGCT TTGACACCTG GCGCGCTGCC GTCCGGCAAC TCGCCCGCTC GCCGCGGGCG 
GAGCAAGAGG TGCAGGCGGT GATCCAATCG CTGTTCAAGA CACCAGGCTT TGGCGCAACC 
CGCGTCCAGG TCGGCAAGTT GGTCGCTACT CTCGCCAGGG AGTGGGAGCG CGCCGGCCGA 
GATCCGGCCG CGCTCATCTT GCCGGCCGCC CTACCCTACG TTCGGCGTGT CGCCGACGAC 
GATTACACCG TCATCGATTG GTTCAAGGAC CAGGAGGAAA TGAAGCATGG ACAATCAGAA 
GCCGCATGA
 
Protein sequence
MRPTTFLVIR YKTLLMQRLL DSVRHGYCHY TAAQVPAEKA LAFCQKFAER YEVALNRDQR 
AYRKRLGKGN ARLILADLAK NGTLHWFLLV SDGDHPARQM EPLRDALESS TRIRVDDYEL 
LRLPRDRNHG GGVRLTWRMT NQRFDTWRAA VRQLARSPRA EQEVQAVIQS LFKTPGFGAT 
RVQVGKLVAT LAREWERAGR DPAALILPAA LPYVRRVADD DYTVIDWFKD QEEMKHGQSE 
AA