Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_5391 |
Symbol | |
ID | 8015963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012851 |
Strand | + |
Start bp | 3587 |
End bp | 4342 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644827223 |
Product | initiator RepB protein |
Protein accession | YP_002978423 |
Protein GI | 241258157 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG5527] Protein involved in initiation of plasmid replication |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAGTCG AGGAAGACAA GCCGGTCGCG TACAGCGAGC CGGCGCTGGC CGAGCGCAAC GTCACCATGA GCAACGCGCT CACGCGGGCA GCACACAGCC TGACGCTTGC CGAAAAGCGG TTAATTGCAG CGTGCATCGC AAAGAACGAC TCGATCCCGT TTGTCGAGCT GCGAAGGGAA GGCGCCTGGC GGGTGCGGCT CTCTGCGGCC GAGTACGCCG AGGCCTTCGG CGTGGATGCC AACACGGCAT ACGAGCAGCT GCAGGGGGCT AGCGACAGCC TGTTCAACCG CTACGTGCGC ACGGTGCGGG AAACCCGCAG AGGGCCGGAG GAATTCAAGT TCCGCTGGGT GGGTAGTGCG AAGTATCACA AGGGCGAGGG CTGGATCGAG CTGGTCTGGT TCCAGGAAGT GGTGCCGCAC CTGTTCGGCT TGCGCCAGGA ATTCACGACC TACAAGCTGC GCCAGGCGGC CGCTCTGCGC TCGGTCTACG CCTGGCGCCT GTTCGAGTGC TTCAAGTCCT GGGCGGCCAC CGGCCGATAC ACGCCGACGA TCGAGGAATT TCATCGGGCA ATGGATGCGT CCGAAAGCCA GCGCAAGAAC TTCAAGGATC TGCGCCGGCG CGTCATCGAG CCGGCCGTGA AGGAGCTGCG GGAGAAAAAC GGCCTGCACA TCGAATGGGA ACCCGAGACG GCCGGTCGCA AAGTCGTCAA GCTGGACTTC CGGTTTCGCG TCTCGCCCCA AGGGGCGCTT TTCTGA
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Protein sequence | MLVEEDKPVA YSEPALAERN VTMSNALTRA AHSLTLAEKR LIAACIAKND SIPFVELRRE GAWRVRLSAA EYAEAFGVDA NTAYEQLQGA SDSLFNRYVR TVRETRRGPE EFKFRWVGSA KYHKGEGWIE LVWFQEVVPH LFGLRQEFTT YKLRQAAALR SVYAWRLFEC FKSWAATGRY TPTIEEFHRA MDASESQRKN FKDLRRRVIE PAVKELREKN GLHIEWEPET AGRKVVKLDF RFRVSPQGAL F
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