Gene Rpic12D_5366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5366 
Symbol 
ID8007863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp256737 
End bp258683 
Gene Length1947 bp 
Protein Length648 aa 
Translation table11 
GC content65% 
IMG OID644822574 
ProductProtein-disulfide reductase 
Protein accessionYP_002973834 
Protein GI241114359 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4232] Thiol:disulfide interchange protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTGGA GCGTGGCAGC GACGCGCACT GGAGGTGGCG GGCGAGTACG AGGCGTCGCC 
CCGGCACAGC TCGTTTTGCT GCTGCTCGCT GTCCTGTGGT TCTGCGTCGC AGGCTCCGGT
GGTGTTGCCC ATGCCGCGGA AGAGGAAAAT CTCTTGCCAC CGGAGCAGGC CTTCCGCTTT
GCGGCGCGGC AACTCGACGA CCGCTCCATC GAGGTGCACT TCGACATCGC CGACGGCTAT
CACCTCTTCC GTGAGCGATT TGTGTTCGCC GCACAGCCGG CTGGGGTCAA GCTCGGTACG
CCCGAGTTTC CGCCAGGGCA GGTCAAATTT GACGAAGCGC TCGGCAAGCA GATGGAGATC
TATCATGGCG GCGTCACCAT TCGCGTGCCG GTGGCGGTCG TGCCGGCTGA CGGCGAATGG
CTGCTGACGG TGACATCACA AGGCTGTGCC GACAAGGGAA TCTGCTATCC GCCGATGCAC
AGTGTGTACA AGGTCGGCGG TGGCTTGCTC GGTGGCCTAT TCGATAAGCA TCGGAGCAGC
AGGCCAATGA CGTCGCCCGT GCCGCCGGCG ATGCCGATTT TGCCCAGCTT GGGAGAGGGG
CAAATTGGGC CGGCTGTTCC ATCAGCCGCG CCAAGGAATG ACGACGGCGA CCGCGTTGCG
CACGTGTTGG CCGGCCACCA GCTTGGGAGG ATTGCTACGG TCTTTTTCGG CCTCGGTCTG
CTGATGACGC TCACGCCAGG CGTGCTGGCG ATGGTGCCGA TCCTGTCGTC AATCGTCGTC
GGCGAGCACG TGACGCGCGG TCGTGCCTTG GTGGTCTCAT TAGCCTACGT GCTCGGAACG
GCGGTGGCTG ATGCCGGTGT CGGCGTGGCA GCGGGATTGC TCGGCGAGAG ATTCTCGACG
GGGCTGCTGA CGCCGTGGGC GCTGGGGGCT TTTACCATGC TGGCGGTGGC CCTGGCGCTG
TCAATGTTCG GACTCTATGA GCTAGGGCGG CTGCCCCCAA TGACGGCATC CTCAAATCGC
TGGTCGGGCG GTCGGATTGC TGTTGCCGCA GCAGCAGGCG TGATTTCAGC ATTGGTCGTC
GTGCGCAGCG TGCCTGTGCC GCTGTCGGGC ACGCTGACCG ATGCCGAGCA AACCGGTGAT
GCGATTGGCA GTGGCGGTGC ACTATTCGGT ATGGCGATCG GCATGGGGGC GCCGTTGGTG
CTGGTCGGCG TCGCTACTGG CTATCTTGTG CCGCGCGCTG GGCACTGGTT GATGGTGACG
AAGCGCTTCT TGGGCTTCCT GCTGCTCGGC GAGGCGCTCT GGGCTGTCAG CCCGCTTTTG
CCACCCTGGG CATTGATGGC GGCGTGGGCC ATGCTGCTGC TGATTGCCTC CGCCTTCCTG
GGCGCCTTCG GTTCGCTTGG TCCAGAGCCT CGCAGCTTGA CCCGGTTGGG CAAGGGCATG
GGCATGGTGG CCGCGCTGGC AGGGGCGATC CTGCTGGTCG GTCTGGCGTC CGGCGGACGG
GATCTGCTCC AGCCGCTGTC GCATCTGCGT GCTGGCCTGA TGGCGCCCGC CTCCACTGCT
GGCCCGGCGC TGGTGCGCTT CGAGCGCATC CGTTCTGTGG CCGAACTCGA CGCGCGCCTG
GTGCAGGCCG CCGCGGCCGG CAAGCCGGTG CTACTAGATT TCTATGCCGA TTGGTGTGTC
AGCTGCAAGG AGATGGAACG CTTGACCTTT AGCGATCCGA GAGTCCAGGC ACGGCTGGCG
GATGTTGTGC TGCTGCAGGC CGACGTGACA CGCAATTCTG CCGACGATCG CACCCTGCTC
AAACGCTTCG GCCTATTCGG TCCACCCGGC ATCATCTTGT ACGGTGCCGA TGGACGTGAG
AGCCCGGTGC GAGTGATCGG CTTCCAGTCT GCAAGCCTTT TTCTCGACAG TCTCGCGAAA
GCCTTCGGCG ACGACGGGAA GCATTGA
 
Protein sequence
MGWSVAATRT GGGGRVRGVA PAQLVLLLLA VLWFCVAGSG GVAHAAEEEN LLPPEQAFRF 
AARQLDDRSI EVHFDIADGY HLFRERFVFA AQPAGVKLGT PEFPPGQVKF DEALGKQMEI
YHGGVTIRVP VAVVPADGEW LLTVTSQGCA DKGICYPPMH SVYKVGGGLL GGLFDKHRSS
RPMTSPVPPA MPILPSLGEG QIGPAVPSAA PRNDDGDRVA HVLAGHQLGR IATVFFGLGL
LMTLTPGVLA MVPILSSIVV GEHVTRGRAL VVSLAYVLGT AVADAGVGVA AGLLGERFST
GLLTPWALGA FTMLAVALAL SMFGLYELGR LPPMTASSNR WSGGRIAVAA AAGVISALVV
VRSVPVPLSG TLTDAEQTGD AIGSGGALFG MAIGMGAPLV LVGVATGYLV PRAGHWLMVT
KRFLGFLLLG EALWAVSPLL PPWALMAAWA MLLLIASAFL GAFGSLGPEP RSLTRLGKGM
GMVAALAGAI LLVGLASGGR DLLQPLSHLR AGLMAPASTA GPALVRFERI RSVAELDARL
VQAAAAGKPV LLDFYADWCV SCKEMERLTF SDPRVQARLA DVVLLQADVT RNSADDRTLL
KRFGLFGPPG IILYGADGRE SPVRVIGFQS ASLFLDSLAK AFGDDGKH