| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5307 |
|---|
| Symbol | |
|---|
| ID | 8007804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012849 |
|---|
| Strand | + |
|---|
| Start bp | 198860 |
|---|
| End bp | 199483 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644822517 |
|---|
| Product | LemA family protein |
|---|
| Protein accession | YP_002973777 |
|---|
| Protein GI | 241114302 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1704] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.271744 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGCAG CATGGTCAGT CGTTGTTGCG GTAATTTTGG CAATCAGCCT CTCGGGGTGC
GGCTATAACA CCATTCAAGC GCAGGATGAA CAGGTCAAGG CAGGCTGGTC TGAAGTCGTG
AACCAATACC AGCGGCGCGC CGACCTGGTA CCGAACCTGG TCAACACGGT CAAGGGTTAC
GCAAGTCATG AGAAAGAGGT GTTGACGGAG GTGACTGAGG CTCGCGCGCG TGTCGGCGCC
ATCCAAGCCT CGCCTGCGTT GCTCAATGAT CCGCAGGCGT TTGCCCGATT CCAGTCGGCG
CAGCAGCAGT TGACCGGATC GCTGTCCCGA CTCCTTGCCG TGTCGGAGAA CTACCCGCAG
TTGAAGGCAG ATGCTGGGTT TCGCGATCTG CAAGCACAGC TTGAGGGGAC CGAGAACCGG
ATCACCATTG CACGAAATCG GTACATCCAA TCGGTACAGA GCTACAACGT GACCGTGCGC
TCATTTCCAT CGAATCTGAC CGCGAAGGCC TTCGGCTATC AGGAGAAGCC CAATTTCACC
GTTGCCAACG AGACGGCCAT TGCCAAGCCG CCCCAGGTGG AATTCGGTTC GCCGTCCGCC
AGTGCGCCGG GGAGCTCCAA GTGA
|
|---|
| Protein sequence | MRAAWSVVVA VILAISLSGC GYNTIQAQDE QVKAGWSEVV NQYQRRADLV PNLVNTVKGY
ASHEKEVLTE VTEARARVGA IQASPALLND PQAFARFQSA QQQLTGSLSR LLAVSENYPQ
LKADAGFRDL QAQLEGTENR ITIARNRYIQ SVQSYNVTVR SFPSNLTAKA FGYQEKPNFT
VANETAIAKP PQVEFGSPSA SAPGSSK
|
|---|
| |