Gene Rpic12D_5262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5262 
Symbol 
ID8007967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp149845 
End bp150909 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content64% 
IMG OID644822472 
ProductAAA ATPase 
Protein accessionYP_002973732 
Protein GI241114257 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.786609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATA CCCTTACCGA TCAAGTTACG CCCCTCACCA ATCAGGTTTC CCCGTCGCAA 
CTGGAGACCC TGTTGGCTGC CTACATTCCG GCACACCTGC CCGTGCTCGT GACTGGCGCG
CCAGGTGTCG GGAAATCCGA CATCGCAGCC GCGGCTGCAG AGCGCGCCGG CTACGACCTG
CTGATCTCGC ATCCGGTGGT CGAGGACCCG ACAGACTCCA AGGGCCTGCC GTTCCCCGGC
GCGGATGGCC AATCCGCCAG GTTCCTGCCG TTCGGGGATC TGGAGAGGGT GTTACACGCG
AAAGAGCCGT TGGTCTGGTT CTTCGACGAC CTCGGTCAAG CGTCTCAGGC GGTTCAAGCC
GCCAAGATGC AACTGCTGCT CGCGCGCCGC ATCGGCGAGC ACAAGCTTCC CGAGCATGTG
ACGTTCTTGG CGGCGACGAA TCGCCGGACC GACAACGCCG GCGTGTCTGG CATTCTCGAT
CCGGTGAAGT CGCGGTTTGC GACCATCGTC GAGCTTGTGC CAAACGTTGA TGCCTGGGCG
GCATGGGCTG TGAAGTCGCA GCTTCCCGCT GAACTGATCG CGTTCCTGCG CTTCAAGCCG
GATCTGCTGG TGGCGAAGGA GCGCACGCGT GATATCGAGA ACCTGCCGTC GCCGCGAGGC
TGGGGCGCGG TTGGGAAGCA GATGCCCGTG GTGCCAGCTG GCTTGGAAGC AATCGTGTTC
ACCGGTGCTG TCGGCGCTGG TGCCGCGACC GAGTTCCAGG CGTTTCGCGA GACCTTTCGC
AGTCTCCCCT CTGTGGCAAG CGTTCTGTTT GCGCCGGACA CTGCCTCCAT CCCGGAGGAG
CCCTCGGCGC GCATCGGGAT TGCGACGGCA GTTGCGAGTC AAACCACGGT CGCGAACATC
GATCGCGTCC TCGTCTACGC CGACCGCATG CAAGCGGGCG GTGACGGTGA CTGCGCAACG
ATGATGATCA GCGACGCGAT CCGCCGTGAC GAGTCTATCG TTTCCGTGCC GGCTTTCATT
GCAGCGCAAT CCGGCTGGAT CGGTGCCGCG ATGGACGGCC GGTAA
 
Protein sequence
MDNTLTDQVT PLTNQVSPSQ LETLLAAYIP AHLPVLVTGA PGVGKSDIAA AAAERAGYDL 
LISHPVVEDP TDSKGLPFPG ADGQSARFLP FGDLERVLHA KEPLVWFFDD LGQASQAVQA
AKMQLLLARR IGEHKLPEHV TFLAATNRRT DNAGVSGILD PVKSRFATIV ELVPNVDAWA
AWAVKSQLPA ELIAFLRFKP DLLVAKERTR DIENLPSPRG WGAVGKQMPV VPAGLEAIVF
TGAVGAGAAT EFQAFRETFR SLPSVASVLF APDTASIPEE PSARIGIATA VASQTTVANI
DRVLVYADRM QAGGDGDCAT MMISDAIRRD ESIVSVPAFI AAQSGWIGAA MDGR