Gene Rpic12D_5205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5205 
Symbol 
ID8007990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012849 
Strand
Start bp102702 
End bp104000 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content59% 
IMG OID644822416 
Productputative adhesin precursor 
Protein accessionYP_002973676 
Protein GI241114201 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.685771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGCAA TTCTCGGTTA CATGATCGCC ATCGCCCTGT CGTTGCTGAG CGTGGGGCAG 
TTCTACCAGT GGCAGGCGTC GGGCATGACA AACGTGCAGA CTGCGGCCGC GGCAAGCCAG
CAGGTGATCT ACAACAAGGC CGCGGCTCAG TACGTTCAAG ACAACGGGAC ATCGATCGCG
GCGATTGCAA CGCCTACCGT GCCGGTGACC ATCACCACCG CAATGCTGAT CAGCAGCGGT
TACTTGCCGA ACGGCTTTTC GACCACGAAT GTTTTCGGAC AGACATGGCA ACTTCAGGTC
CTGCAGCCCA CCGCGGGGAC GTTGCAGTCG GTCGTGCAAT CGGTTGGCGG GAGGGCAATC
GCGGACACTG TCCAGCTTGT TCAGATTGCC GCCCAAGCAG GGGCGCAGGG CGGATTCGTC
CCCTATGCCG GCCAGAATGG TGACGCAACC ATGACCCCCG CAAATGCTTA CGGCGCATAC
GGGGCATGGA AGCTTCCGTT GACCAATTTC ACCAATCCAG GCAGCGGTCA CCTGGTGTCA
CTGCTTGCGT TCACAGGCGT GAGTGCGAAC AACAGCTATC TGTACCGCGT TCAGGTTCCT
GGCCATCCCG AGCTGAACAA CATGCAGACC GACCTTGGTA TGACCGATCA AGGGGGGGCG
CTGCACAACA TCAGTGGCGC ACAGCAGATC AGCTCACAAA GCTTGCAGGC TCTTTCCGGT
GGTTCGCTTG CCGTGCCATC GATCACGACC GCAAACGGCA AAGTAGTCAC TTGGGAGCAG
GTGGGCGAGG GCGGTGTGCT AGGCCTGAAA GGATCGAACG GTACATCGAT CTACCTTGAG
AGCTTGAATG GCACGTTCCG TATCGTCAAC AACCCTTGGA CACAGTCCAT ATTCTCGGTC
GACCAGTCCG GCGATGTGGT CGCGGCGGGA ACGCAGAGGC TGGGTAACGT TGCTTCGCCC
AACACGGCGT GTGCCCAAAA CGGAACACAG GCAGGCAATG CTGATGGCTC TGGCCAGCAA
TTAGTTTGTC TGTACAACGT GTGGAAACCA ATTGGCGGGA GCTTGCAGCG CTTCGGGTAT
TACACCGCGC AACATGGTTC TGGAATTCCG AGGCCGACTT GTCCGGCGGG CGGAACCCCG
ATGATCGTTG TGACCCCGGC GAACTTTGCG GTCGATCCGA CGACGGTCGT CAACTATGGA
GCGTGGGGAT CAGGCCCGTG GACTGTCTAC ATCATGGATG GATCAAATGC CGGCATCGGT
GGCGCGACTG CCACTGTTGG GACCTATTGC GGATACTAA
 
Protein sequence
MDAILGYMIA IALSLLSVGQ FYQWQASGMT NVQTAAAASQ QVIYNKAAAQ YVQDNGTSIA 
AIATPTVPVT ITTAMLISSG YLPNGFSTTN VFGQTWQLQV LQPTAGTLQS VVQSVGGRAI
ADTVQLVQIA AQAGAQGGFV PYAGQNGDAT MTPANAYGAY GAWKLPLTNF TNPGSGHLVS
LLAFTGVSAN NSYLYRVQVP GHPELNNMQT DLGMTDQGGA LHNISGAQQI SSQSLQALSG
GSLAVPSITT ANGKVVTWEQ VGEGGVLGLK GSNGTSIYLE SLNGTFRIVN NPWTQSIFSV
DQSGDVVAAG TQRLGNVASP NTACAQNGTQ AGNADGSGQQ LVCLYNVWKP IGGSLQRFGY
YTAQHGSGIP RPTCPAGGTP MIVVTPANFA VDPTTVVNYG AWGSGPWTVY IMDGSNAGIG
GATATVGTYC GY