| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5196 |
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| Symbol | |
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| ID | 8007776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | + |
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| Start bp | 94311 |
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| End bp | 94787 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644822407 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_002973667 |
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| Protein GI | 241114192 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGAT CACGACTCCG AGTGCGAGAC GTGAGCGGTG CGAAAAGGCT GTTCGCTTTT
TTCGCACTTC TGCTGGCTCT TGCCAGTTTA GCGCGGGCGG ATTGTCTCGA CGACGCGGCC
AATTACTACC GGCTCGATCC GACGCTCGTT CGCGCCATCG CGTGGCACGA GTCCGGCATG
CGGCCGCTTG CTGTCAATCG CAACTCTAAC GGCAGTGTTG ACGTTGGCCT CATGCAGATC
AACTCCTCCT GGTTTCCGAC GCTGGCGCGT GTGGGCATTG CCCCTGAGCA CTTGTGGAAT
CCCTGTGTTA ACGCCTACGT CGGGGCGTGG ATTCTGAGCT CGAACATCGC GCGCCTGGGG
CCGAACTGGA AAGCCGTCGG CGCATACAAC GCCACTTCAC CGGACAAGCA GTTGCGCTAC
GCCAACCAAA TCTACGCGCG CTGGCAGGCA TTGCAGCGCG CTGGTGCCAG TCATTGA
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| Protein sequence | MSGSRLRVRD VSGAKRLFAF FALLLALASL ARADCLDDAA NYYRLDPTLV RAIAWHESGM
RPLAVNRNSN GSVDVGLMQI NSSWFPTLAR VGIAPEHLWN PCVNAYVGAW ILSSNIARLG
PNWKAVGAYN ATSPDKQLRY ANQIYARWQA LQRAGASH
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