| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5192 |
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| Symbol | |
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| ID | 8007772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | + |
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| Start bp | 90171 |
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| End bp | 91052 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644822403 |
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| Product | Conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_002973663 |
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| Protein GI | 241114188 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG
[TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0164987 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATGT CCCTATTGCG CACAACTTCC TCGGCGCTCG CATGCGCTTG TCTCGCGCTG
GCTGTTGTCG GAGGCGCGTG GGCTGCTGCC GAGCGCCCCG CGAAGCGCGC CGAACCTGTT
ATCCCCCCGC TGAACTTGGG ATCAATGGCG GATGCCATGA ACCCCATGAA TCCGTTCAAC
GGTGGAGCGG AACCGCTGGC TATGCCGGGC GATTCCCGCC TCGTCGTCTT TACGTACAGC
AAGGATCAGA TTTATCGCGT CCTGACCGCG CCACTGAAGG GAACCACCAT TGAGTTCCCG
GACGATGAGC AGATCGTGTC GGAGCCGGCG TGGGGTGACA GCGTGCGCTG GGAATCGTCA
ACGGACAACG GCAATCATCT CTATCTCAAG CCGCACGCTG CCGGTCTGGT CAACACCCTG
TCGGTGACCA CAAACAAGCG CTCCTACGAG TTCACGCTGG TGTCGTCCCC CCTGGGCGGG
ATCTTCTACC AGAAGGTTCG CTTCCGCATC CCTGAGACCG TGATGGCCAA GATCAAGGCG
CGGGCAGATG GCGAGGCACG CGAGCAGGGA GAGCGTCCGG CGAACACCGT CGGCGTTTCG
CCGGACAAGC TCAACTTCGA CTATTCGACG TCGGGAAGCG CGGACTTCAA GCCCGACGCT
GTCTTTGATG ACGGCAAGCT CATCTGGATG CGCATGCCCG CGACTGCCAG CGAGTGGCCC
GTCGCGCTGG TGAAGGACGG AAGTGATTTC GTCGTAGCGA ACTTCATTCG CCGAGGCGAC
TACCTCGTGC TGCAGCGCCT GGCAGAGACC GTGGCGCTTC GGTCGGGTAG CACGGAGGTG
ATCGTGCGCC GCGGCCGCGG TCGCTTCTTG GGTCTCTTCT AA
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| Protein sequence | MTMSLLRTTS SALACACLAL AVVGGAWAAA ERPAKRAEPV IPPLNLGSMA DAMNPMNPFN
GGAEPLAMPG DSRLVVFTYS KDQIYRVLTA PLKGTTIEFP DDEQIVSEPA WGDSVRWESS
TDNGNHLYLK PHAAGLVNTL SVTTNKRSYE FTLVSSPLGG IFYQKVRFRI PETVMAKIKA
RADGEAREQG ERPANTVGVS PDKLNFDYST SGSADFKPDA VFDDGKLIWM RMPATASEWP
VALVKDGSDF VVANFIRRGD YLVLQRLAET VALRSGSTEV IVRRGRGRFL GLF
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