| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5153 |
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| Symbol | |
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| ID | 8007733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012849 |
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| Strand | + |
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| Start bp | 53252 |
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| End bp | 53830 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644822365 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_002973625 |
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| Protein GI | 241114150 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.198908 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.46298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACT TCCGCCTGTT TATTGCGCTC GATCCCACGC CCGAGACGGT TGCGGTCTTG
CGGCGCGCGC AGGTCTGTCT GCGGGACGTC CATTGGAGTG GGGCGCGTTG GCTACCCCCG
GAACAATGGC ACGCAACGCT ACGCTTCTTG GGGGCAACGC CTGAGGATCA GGTGCAGCAC
TGGAAGCACA CGCTGCAGCA GTTCGACATG CTCGCCCGGG ATGCAGCGCC ACTGCCGATC
GACGGCGTTG CAATCTGGCC AGCGCCAGCG CACCCCCGTG TGATCGTGGT CACCGCGAAG
TTCGCCATAT GGGCGCAGGA TATGGCGACG CGCTTGGAGG CCCTCGCGCG CGAAGCCGGC
TATCGCGCGG AAACGCGAGC ATTTCACCCG CATGTCACGC TCGCGAGAGT TGGCGCACAT
GCGGCAACTG CGCGATGCTT GGCCGCGGTG GACAATGCCG CCCGGGCGCT CGATGGCGCG
CACCTGCAGT TCGGTAGTGT CTCTCTGTTT GTCAGTCGGT CGCCGGCGGA GGGGCCAGCC
TATGAGAGGC TGGCGACCAT GGAGTTTCGC CCGAACTGA
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| Protein sequence | MSNFRLFIAL DPTPETVAVL RRAQVCLRDV HWSGARWLPP EQWHATLRFL GATPEDQVQH
WKHTLQQFDM LARDAAPLPI DGVAIWPAPA HPRVIVVTAK FAIWAQDMAT RLEALAREAG
YRAETRAFHP HVTLARVGAH AATARCLAAV DNAARALDGA HLQFGSVSLF VSRSPAEGPA
YERLATMEFR PN
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