| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5123 |
|---|
| Symbol | |
|---|
| ID | 8007909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012849 |
|---|
| Strand | - |
|---|
| Start bp | 26755 |
|---|
| End bp | 27297 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644822337 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002973597 |
|---|
| Protein GI | 241114122 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.068099 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGA GCGAATTTCG CCGACTAGCG ACGAGGATGG ATCAGCAGAT GCAACAGCTT
GCCGCCGAAG GCGTCAGCGA TGCCCATGCC GTCATCAATC GCATGATGGG GTATGTGCCC
GACCTGCATC GAATTTGGGT CAACACTTCC GACCAGCAGC TCATGGCACT GTCCCGCGAA
TTCCCAGGCT TCTACCGCTA CGCCCGCATC ATGGAAGAGG CATCCGACGC CGAGCGCAAC
AAGGCATCGC GGCCCTATGA CGGCATGGCC GAGTTCTCCG AACAGCACAA AGAAATGGGG
GCGCAACTGC TGGCAACGGC AAACACACTT GAGCGCGGCT ATCAGGCGCT TCGTGCAGGC
GGCAACCTGC AAGCCTTCCA GCCACACCTC AAGGAGCTGG GCCGGCTGCA TCGGCAATGG
CTGTCCGATC TGGACAGCTT CAAAAACTCC CTACGTGCGC AGGGCGCAGA ACCCAAGGTG
CTGGAATACG TGAACGATGC GTTCGGCCTC ATGGCCGAGC GCATCAAGCA GCTTGCCGGT
TGA
|
|---|
| Protein sequence | MSMSEFRRLA TRMDQQMQQL AAEGVSDAHA VINRMMGYVP DLHRIWVNTS DQQLMALSRE
FPGFYRYARI MEEASDAERN KASRPYDGMA EFSEQHKEMG AQLLATANTL ERGYQALRAG
GNLQAFQPHL KELGRLHRQW LSDLDSFKNS LRAQGAEPKV LEYVNDAFGL MAERIKQLAG
|
|---|
| |