Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_5067 |
Symbol | |
ID | 8017356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | - |
Start bp | 358030 |
End bp | 358869 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644828755 |
Product | hypothetical protein |
Protein accession | YP_002979955 |
Protein GI | 241589930 |
COG category | [R] General function prediction only |
COG ID | [COG4469] Competence protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.554707 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCAGA TCGGCCAGGC TTCCAAACTG TGGCCCACCC CCGCAGCGTC GCGGCATGGA CATGTCGCGA ATACCCATCA CAAGTTGTCG GCTGGAGCAG GGTGGGCGCG CTACATTGGT CACAACCGCC ATCGCGCCGC TGGCCACAAA GCGCCGTCAT CATTGAATTG GAGGGTAGGG GTGCCGCTCA CGTGCTTGGA TGCGGACGGA ACCATCGTGT TCGCGCACCA CCTCACACGA GATGAGTTGG AAGCCTTACG CAACAGTCAA AAGATGCTCT CGTCATTGCA CTTCGCCTGT TGCACGGCAC GAGTCGGTTT GCGCGTGTCG AAGAACGGTC TGAACCACTT CTATCATCTC TCCGACGCTC GCTCCTGCCC ATACGCAGAG GAAACGGAAG CGCACCTTAG CCTGAAGGTG GCCGCTATGG AGGCAGCTCG TCGAGCGGGT TGGCAAGCGG ATTGTGAGGT ATCAGGCGGC TTCGACGATT CACAGCAGTG GAGGGCAGAT GTTCTCGCGT GGAAAGGCGC AGTGAGGATC GCTTTTGAGG TTCAGATCTC GAACGCAACG TGGGCACAAG TTGTTGCCAG ACAAGCGCGA TATCGTGCCG CGGGAGTTCG CGGCCTTTGG CTGCTGGGAC AGGACAGCTA CCAAGTCTGC AAAGAAGTGC CGGCATTCCA AGTTCGCGAT GACGGGGAGG GCGACTGGAT GGTCAGGATC AGTCCGCCGA AGGAGCCCCA CAATGTCTGC TTGCGCGCCT TCAAAGGCAA CTGGCTCGCC CTCGAATCAT TCATCCAAGC TGCACTGACC AAAAAACCTG GTCTGGGCCC CGGTGCTTGA
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Protein sequence | MAQIGQASKL WPTPAASRHG HVANTHHKLS AGAGWARYIG HNRHRAAGHK APSSLNWRVG VPLTCLDADG TIVFAHHLTR DELEALRNSQ KMLSSLHFAC CTARVGLRVS KNGLNHFYHL SDARSCPYAE ETEAHLSLKV AAMEAARRAG WQADCEVSGG FDDSQQWRAD VLAWKGAVRI AFEVQISNAT WAQVVARQAR YRAAGVRGLW LLGQDSYQVC KEVPAFQVRD DGEGDWMVRI SPPKEPHNVC LRAFKGNWLA LESFIQAALT KKPGLGPGA
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