Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_5003 |
Symbol | |
ID | 8017430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | + |
Start bp | 290055 |
End bp | 290573 |
Gene Length | 519 bp |
Protein Length | 172 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644828691 |
Product | hypothetical protein |
Protein accession | YP_002979891 |
Protein GI | 241589866 |
COG category | [S] Function unknown |
COG ID | [COG3236] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR02464] conserved hypothetical protein, ribA/ribD-fused |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.468369 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGAGA TCCTAGGAAT GACACTGTTC TTCGGTGCCG AAGATGCCTT GAGCAACTGG CATCCGGCAC GGTTCACGTA CCGTGGCGTC GAATTCTCGT CAGTCGAGCA GTTCATGATG TACTCGAAGG CGCGACTGTT CAACGACGAC CAGACCGCGA GGAAGATTCT GTCTGCTTCC GAACCGCGTG AACAAAAGCG ACTCGGCCGC GAGGTCCGGG GATTTGACGA AGCAGTCTGG ATCATCAAGC GTAAGCCGAT CGTGACCGTT GGCTGCCGTG AGAAGTTCTG GCAGAACCAA CCTCTTGGCG AGGTTTTGCT CGGGACGGAC GATACCCTGC TGGTGGAAGC CAGTCCCTAC GACCGGATCT ATGGTGTGGG TCTCGCCTGG AATGACCCGA GGATCCGGGA CGTGAGCCAG TGGCAGGGCC TGAACCTGCT CGGTGAAGTC CTGATGGAGG TTCGCACCTG GCTGCCGAAA GCCGGTGCGC TGGCGGCCGG CACGGTCACT GCGCACTAG
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Protein sequence | MHEILGMTLF FGAEDALSNW HPARFTYRGV EFSSVEQFMM YSKARLFNDD QTARKILSAS EPREQKRLGR EVRGFDEAVW IIKRKPIVTV GCREKFWQNQ PLGEVLLGTD DTLLVEASPY DRIYGVGLAW NDPRIRDVSQ WQGLNLLGEV LMEVRTWLPK AGALAAGTVT AH
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