Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4984 |
Symbol | |
ID | 8017411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | + |
Start bp | 274062 |
End bp | 275300 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644828672 |
Product | DNA methylase N-4/N-6 domain protein |
Protein accession | YP_002979872 |
Protein GI | 241589847 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0863] DNA modification methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.677083 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.015231 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTGG ACCTTTTCTC GCACGTCGCC AGCGCCTACG CGGATGCACC GCGCGGTCGC CTGACGAACG CTCAGTTCTA CCAGGCTGTC GCCGTACGTG CCGGCATCTC CATCCAGGAA CTCCACGAAA AGACTCCCAT CGGAAACGAT GGGAAGCTCT ACTCACTTGT ACACCGGAAG CTGCGTTGGG GGCAACAGTC GCTCCGACGC ATGGGCATTC TCGAGCGGGT TGCAGGCGAG CGGGGCATCT GGCAGCTGAC GGAGTCGGCC GGCAAGAAAT TGGACGAGGC TGGGAATGAA GTTCAACTGA TTGCGTTCTC GACAAAGCTG GGCATTGCGG TCTTTGGCAA TTGCAAGCAG GTGTTTGCGG GGCTGAACGA ACCTATCCAG TTGGTAGTTA CATCACCTCC CTTCCTCTTG GCAAAGCCTC GCGCATACGG GAATCCGCCG ACGATGCAGG ATTACATCGA CTTCGTCTGC GGTGCGATCG AGCCGGTGTG CCGCCATCTA GCACCCGGAG CAAGCATCGT GATCAACCTT AGCAACGATT GCCACGTCAA AGGCTCGCCC GCACGCTCTA CCTATCTTGA ACGCCTGGTA CTTGCACTCG AAGACCGGTT GGGCCTTCAC CTGATGGATC GGATCGTCTG GAAGTCCTCA AAAGCGCCTG GGCCGACGCA GTGGGCCTGT CTGCGGCCGA TTCAACTTAA GACCGCATAC GAGTACTGCT ACTGGTTCAC CAATGACCCG TCTTGCGTGC GCTCCAACAA TCGGAAGATT TTGCTGCCCC ACACCGAGCG CCACCTCAAG TTCATGGAGG AGGGGGGCGT CAAGAAGGCC GCGTCCTACG GCGATGGCTC ACAGGTGCAC CGCCTGGGTC AGTTTGGTAC CGTGACTGAA GGCCGTTTGC CATCGAACGT GCTTGAAGTT GGAACGTCTT GCGCGGATAC CCGGGCGTAC CGCCGTCGTG CTGCAGAACT AGGGCTGCCA TTGCATGGAG CAATGATGCC GACGCGCATT CCGGAGTTCT TCATCAAATT CCTCACTGAG CCGGGTGACC TGGTCGTCGA TCCGTTTGGC GGCACCGGAA AGACCGCGCT TGCTGCTGAG CGTCTCGGCC GACGGTGGGC AATGGCAGAG AAGATGCTGC AGTACATCCG AGGGGCAGCA ACACATTTCG AGCAGTTTGA CGGGTACTCC CTCAACCCCG TTTTCGATTC GGTCAAGTAC GCAGCATAA
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Protein sequence | MQLDLFSHVA SAYADAPRGR LTNAQFYQAV AVRAGISIQE LHEKTPIGND GKLYSLVHRK LRWGQQSLRR MGILERVAGE RGIWQLTESA GKKLDEAGNE VQLIAFSTKL GIAVFGNCKQ VFAGLNEPIQ LVVTSPPFLL AKPRAYGNPP TMQDYIDFVC GAIEPVCRHL APGASIVINL SNDCHVKGSP ARSTYLERLV LALEDRLGLH LMDRIVWKSS KAPGPTQWAC LRPIQLKTAY EYCYWFTNDP SCVRSNNRKI LLPHTERHLK FMEEGGVKKA ASYGDGSQVH RLGQFGTVTE GRLPSNVLEV GTSCADTRAY RRRAAELGLP LHGAMMPTRI PEFFIKFLTE PGDLVVDPFG GTGKTALAAE RLGRRWAMAE KMLQYIRGAA THFEQFDGYS LNPVFDSVKY AA
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