Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4973 |
Symbol | |
ID | 8017400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | + |
Start bp | 264957 |
End bp | 265472 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 644828661 |
Product | hypothetical protein |
Protein accession | YP_002979861 |
Protein GI | 241589836 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0434846 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00239058 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCAGAACA ACCAGGTTCT CATCCCGGCC CACCTTGTCC ACGCGCTGGT CGCTTTTGCA AAAGCACAGG GGCACGACGG AAACACGCCG GCTCGGGATA GCACGCAACC GGCTGATGTC CGACCGACGT CAGTTTTACC CCCGGTTGGC GACGCGGTCC GAGAGGTTGA AGCGTTACTT GCGGCCAGCA AGGGCGGTTT CACTGATATC GCAGCAGTGC CCTGCATTTC GACCTGTCAC ATTTCGGTCG AGACGAATGC AATGCTCGAG CAGACCGGCG ATCGCACCCT GTGGTTCTAT GGCCAATACG AATCGGGATA CTGGATTCGG GTCCCTCACG AAGATCCGAC AACGGCCGCC GATCCATTCT GGTTGGCGGC ACCAGACGAC ATCCGATCAC TGTGGTCGTG GGCTCGTGAG CGCAGCTATT TCTGGCTGCG TTTGGATGCT GACGGCACGC AAGTCGATGG CTTACCGGTG TACAACTGGG AATTCACCAC AGACGTGGAT GGCTGA
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Protein sequence | MQNNQVLIPA HLVHALVAFA KAQGHDGNTP ARDSTQPADV RPTSVLPPVG DAVREVEALL AASKGGFTDI AAVPCISTCH ISVETNAMLE QTGDRTLWFY GQYESGYWIR VPHEDPTTAA DPFWLAAPDD IRSLWSWARE RSYFWLRLDA DGTQVDGLPV YNWEFTTDVD G
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