Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4757 |
Symbol | |
ID | 8017469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | + |
Start bp | 101663 |
End bp | 103183 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 644828446 |
Product | hypothetical protein |
Protein accession | YP_002979646 |
Protein GI | 241589621 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACGCA GCTTTCTGAA TAAGGTTTAC TCCCGCCTCG CTATCGCTTG CCTCGCTGGA CTTGCGGCAA GCGGTTGCGC AACGACGCCG CTCCCCGCGG CCTCGAATCA GAATTACGAC TTTGCATACC AAACGTCGGG CGGTACCGGC GTGCGACCAA GTCAAGTGTT TGATGATGGA ACGAAAACGT ACTTCCAGTT CCCGATCGGG AAGTTCGCAC CGGTTATCGA ACTGGATGAA GGGGGCAGGC GAAAACTGCT CGAGCCTATG CAGGAAGGGC TCTACTACAC CGTTCCCCTA ATAGGGAACC GTTTCGTGCT GCAACGCGGC CAGGAAACTG CCGTCGTTGA ATACGACGGA GCGAAATCCC GTCAAAACGG CTCTGTTTCT TCCCTCGTTG TGCGTTCGAA CGAAGCGTCT GTTTCTCCGC AGACTCTTGA CCCTGACGCC TTGTACGCGA TATTGCAGAG AGGCCGCCCG GTTCACGTGA AGCAATCGAT TCAGGCGAAC AGCTATGCAG TTCCTGTAAC GGGCGACAAC GCAGCATGGG CAACGTCGCT TCCTACGGAA GATCGTTTCG ACGTGCTCTT CAAGCGCGGG AGTTCGACGC TGATTGTGCC CAAGAAAGCT GCCGCCGCAG AAATCCTTGA ATCTGCACGA CGTGCTGGGC GAATCATTGT CACCGGCCGC GATGACGACA GCTTGATGGA GACACTTGCT GAGAAGCGCG CTGGTGCAGT GAAGGAGTGG CTCGTGAAGA ACGGAGTTGC CCCAAATGTC ATCCGACTTG CTGCTGATAC GACCGGTGCG AGTGGCTTGG ATGCGCAGCT TCAAATCTTT AGCAAACCGA CACAAGTTCC GGTGAACTAC GCTTCGCCAG ATTCTGTGGC ATTCAAGGCA GACGCGATTA AGACCGACAT GCAGTCAGGG GCCATAAGTC GGGAAGAGGG TGCGCGCAGG CTCGCCACTT TGGTTGGCTA TGGAGACGCT GGCGGAGATG GTCAATCGGG AGCGGCCCTG ATCTCCTTGA AGTCGACTCT GTCGGTGTTC GCCGGCAAGG AGGGGTACCG CCTGACTTGG AGCGATAGCC TTGGAGATTC GAAAATCTCC GTACCGCCGA TTGATCGCCT GCCAGGCATT GAGGCGAAAG CCGCCGAAAT AGCTAAGGCG GGAACTGGCT CGTTCAATCT CGCCGTAGAC AAAGAAGCAA AGTCGCTCTA TGCGTCCGCC GATCTGAATG GTCTTGTACA GGTGGCAGGC AAGGCAGGCA TCGAGACGCT TGCCGAGTCG AACGGTTCCT TAACTGTGAA ACTCCGTAGT ACGCCGAAGA CGATGTACGT TTTCGATCGG GTCGACAAAT CCGACCTCTC GGTTGATTGG CAAGATCCAA CATCGTTCAC TGTGCCTATG CGGGACAAGA TTGAACTTGC ACTGGACAGC AAGACCTTGC AATTGACGCG CGTAGCGGAC AAGCGCTACG TCATTGTGCT TCAACCCTCT GCCGAGACTA CGACGAAATG A
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Protein sequence | MKRSFLNKVY SRLAIACLAG LAASGCATTP LPAASNQNYD FAYQTSGGTG VRPSQVFDDG TKTYFQFPIG KFAPVIELDE GGRRKLLEPM QEGLYYTVPL IGNRFVLQRG QETAVVEYDG AKSRQNGSVS SLVVRSNEAS VSPQTLDPDA LYAILQRGRP VHVKQSIQAN SYAVPVTGDN AAWATSLPTE DRFDVLFKRG SSTLIVPKKA AAAEILESAR RAGRIIVTGR DDDSLMETLA EKRAGAVKEW LVKNGVAPNV IRLAADTTGA SGLDAQLQIF SKPTQVPVNY ASPDSVAFKA DAIKTDMQSG AISREEGARR LATLVGYGDA GGDGQSGAAL ISLKSTLSVF AGKEGYRLTW SDSLGDSKIS VPPIDRLPGI EAKAAEIAKA GTGSFNLAVD KEAKSLYASA DLNGLVQVAG KAGIETLAES NGSLTVKLRS TPKTMYVFDR VDKSDLSVDW QDPTSFTVPM RDKIELALDS KTLQLTRVAD KRYVIVLQPS AETTTK
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