| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4756 |
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| Symbol | |
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| ID | 8017468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012855 |
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| Strand | + |
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| Start bp | 100323 |
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| End bp | 101657 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644828445 |
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| Product | conjugation TrbI family protein |
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| Protein accession | YP_002979645 |
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| Protein GI | 241589620 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.745717 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAA AGATGATCAT TGACCCGGAG TCCGATGACG GGGGGCTTCC GAAGAAGAAT
ATGCACTGGA AGATCGTGCT GTTGCTCAGC GCGGTCGTAC TGGTTGCAAT GTTCATCAAG
TTTGGGGGGG GCAGTACCCG CAACACTGAG TTCAAGCCCA CGCCAGTACA GGCGGCCCAA
CTGGGTCCCG CTGGAGACCC TACCTCCATA GATAAGGCGA AGGCTGAAGC CGAGGAGAGA
GTCCGTCTTG CGAAGGTACG AGAGCAAGCC GATTTGACCG AGGCGAAGAG AAAGCAGGAG
GAGCTGCTTG CCCAGCAGGC TCGTCAGGCA GCCAACGGTG GTGCAAGCGC TACACCGCCT
GTAACACCAA TTGCGAACCC TGCAACGGCG GGCGGGCAGC CCAATGGGGC ATTGCCTCCT
CTTCCGGCAG GGCTCGCTGG AACTGGCTCG CGACCTGGTC GTGCAGTCTC AGATCCGGAC
AGGGAAGCGA TGATTCGCAA CTCCCCGGTT CTGGTGAAAG GTGCGGCCTC AGGTCCAAAC
CAGGCACAAG GTAGCGGCGG CAGCAGCCTC TCGCCTCCTG AGCTCTCTGA TGCGCAGCGA
AAGCAGATCG CAGGCTCCTT CGATATGTCT TCAATTCTGA AGAACATTCC TGGGATGCAG
AATGGCGCCG CCCCGGGAGC CGGTGCTGCC GCGAACGCGC AGTGGTTGAG TGATTACAGT
TCGAAAGCAG CAGACCATAC GGTTCAAACT GCCTATTCTC CGCCAGCAAA GTACTACCTC
CGAGCAAACA CGCTGATTCA GGCTGTAACC ACTCGAGCGA TCAACAGCGA TCTCTCTGGT
CCGTTGGAAA TGAATGTAGT TAGCGATGTC TACGACACGA TAACGGGGAC GCAGATTCTG
ATCCCGGCAG GTTCGACCAT TTCAGGCGGA AACAACGGAG ACATTCGGCT TGGCCAGTCG
CGGATCGAGG TTGGAATAGG GCGGATTTGC CGGCCCGACG GGATTTGTGT GGACACACCG
AACTCGCAGG GAGCTGATTC GTCTGGTGCG ACTGGGTTGA CCGGTGACGT CAACAATCAT
TTCCTGCAGA TTTTCGCAAC TGCCATCATT CCTGCTGCTT TGGCTTATGT GACAAGCCCA
AAGAGTGCTG GCAGCGGAAA CGTGTATGCA GGCAGCGGGA ATCCGATGAA TGCCGCAGGG
CAGATCCTGA CTCAGACTTC GCAGCAAATC TTGAATCGCT ACAGCAACGC GCCGCCGACC
ATCTCTGTTG ATCCCGGTAC GCCCGTCAGC ATCGTGCTTG GCAAAGACTT GGTGTTGCCA
CCTTTTCGTA GGTAA
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| Protein sequence | MTEKMIIDPE SDDGGLPKKN MHWKIVLLLS AVVLVAMFIK FGGGSTRNTE FKPTPVQAAQ
LGPAGDPTSI DKAKAEAEER VRLAKVREQA DLTEAKRKQE ELLAQQARQA ANGGASATPP
VTPIANPATA GGQPNGALPP LPAGLAGTGS RPGRAVSDPD REAMIRNSPV LVKGAASGPN
QAQGSGGSSL SPPELSDAQR KQIAGSFDMS SILKNIPGMQ NGAAPGAGAA ANAQWLSDYS
SKAADHTVQT AYSPPAKYYL RANTLIQAVT TRAINSDLSG PLEMNVVSDV YDTITGTQIL
IPAGSTISGG NNGDIRLGQS RIEVGIGRIC RPDGICVDTP NSQGADSSGA TGLTGDVNNH
FLQIFATAII PAALAYVTSP KSAGSGNVYA GSGNPMNAAG QILTQTSQQI LNRYSNAPPT
ISVDPGTPVS IVLGKDLVLP PFRR
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