| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4755 |
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| Symbol | |
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| ID | 8017467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012855 |
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| Strand | + |
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| Start bp | 99559 |
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| End bp | 100326 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644828444 |
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| Product | Conjugal transfer protein TrbG/VirB9/CagX |
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| Protein accession | YP_002979644 |
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| Protein GI | 241589619 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
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| TIGRFAM ID | [TIGR02775] P-type conjugative transfer protein TrbG |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.369632 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTCGA TCCTTCTGAA GTCTGCCGCG GCTCTCGTGG TTTTGTCGGC CTCTTTCGCC
GTGCGAGCGG AGCTTATTGC TACCCCGCTT CCTGGTGACA CCAGGTTGGT CCGATTCGAG
TTTGATCCAA ACAACACGTA CCAAGTGCTT ACTCGCCCGA AGTCGGTTAC TGACATCGAA
CTCGAACCGG GGGAGGTCGT GAAAGGAATG GCAGTCGGGG ACTCCTTCTC ATGGGATTGT
GAGACGGGCG TCCCCGGCCA CATATTTGTT CGCCCGAAGT ACGACGACAT GGTGACCTCT
GGGACCGTAG TCACGGACAA ACGGACCTAC CAACTTATGC TGCGATCGAC GTCAGCTGAC
GTGGGAAAGT GGTACCAACG CGTGACCTGG GGCTATCCAG CGATGTCGAT TTTGCAACCT
GTCGCTACCG CTGGCGTGGC TCCACAGTCG GCTGACACCA AATCTCCCGT AGGCAGCTTG
GCTCGTGGTG TTTCCGTTGA CCAACTCAAC TTCGACTACT CGATTAGTGG CGGAGCGGCG
TTTCGTCCAG TTCAGGTTAT CGACGATGGG ACATTTACTT GGCTGCAGAT GCCTGCCAGG
TTGCAGGATT GGCCTGCTGT GTTCTGGGTG ACTCCCGACA ATCGGTACGC CGCCCTAACC
CCTGTCCCTG ATGGCCGGTA CTTGAAGGTC ACGAAGGTCG TCCACAAGCT GCTCCTGAAG
ATCGGCAAGG AAGAGGTCGA GATCACCAAC AATAAGGTCG CTCAATGA
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| Protein sequence | MMSILLKSAA ALVVLSASFA VRAELIATPL PGDTRLVRFE FDPNNTYQVL TRPKSVTDIE
LEPGEVVKGM AVGDSFSWDC ETGVPGHIFV RPKYDDMVTS GTVVTDKRTY QLMLRSTSAD
VGKWYQRVTW GYPAMSILQP VATAGVAPQS ADTKSPVGSL ARGVSVDQLN FDYSISGGAA
FRPVQVIDDG TFTWLQMPAR LQDWPAVFWV TPDNRYAALT PVPDGRYLKV TKVVHKLLLK
IGKEEVEITN NKVAQ
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