Gene Rpic12D_4731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4731 
Symbol 
ID8017389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp73707 
End bp75035 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content59% 
IMG OID644828421 
ProductRibonucleotide reductase alpha subunit-like protein 
Protein accessionYP_002979621 
Protein GI241589596 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0209] Ribonucleotide reductase, alpha subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.181499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTCC AACCCCAGGT TATTGAGCGT CAGCTCATTG CGCAGTCAGG CGCGTTTGGT 
GCCAGCAATG GCACTGAGCA ACGCCCCAGT TGGCTCGCCG ATCCTGTGTT TGACCGTGGT
GTTCTCCTCT CCGAGTACAC CGCAACGACT GACGCTAGCC GCGCGCCGGC GGTCAGTTTG
ACGCTATCAA GCAGTAGTTC AACATACGAT GTCCTGGCGG AAGTAGCTGT TGCCGGGCGG
GTGGGTATGC CGCTTCTTGT CGATCTGGCG AGCGTGGGTC AACCCATCGA TGATTCCGAT
TCCCATGAGC CCAATCGGGC GGCGACGTTG CAGGCAATCG AAAGGCTGTA TGCAGCGTCC
GCGCGAGGCA GCGCTGTCGA AGGGATCCCT CCGATGATCG TGATCAGCGA AGGTGATCTT
GCAGATGCTG CTCGTCTCGG GAATGTGGAA AAGTACGTGC GCGTTGGCGC AAGCCAGCGT
GCTATAGGCG AATTGCTCGC GCATCCGCAG CCCGTTCTTG AATTTCTGGG TACGGAAGTC
AGCGGAATGA TTTTTGGTGC GGGTTCAGTG GTTCGGGATG GTTGCGGCGG TGTTTTCGGT
ACGAGTGCCG AATTCGTCGA CGCAAGCGAG ATGGTGGCAG GTTCGGTTAT CAACCTCTGC
GACTATCTTG CTGATACTCC ACGCGAAAAC AACTGGTTCG ACAGCAAGCG GCTCGAGGAG
CAAATCCGGC TGGCGGTTCG CGAGCTTGAC TCGATGCACG ACGTCAAGGA GACGCTGGGA
TGTCTGGGGC AACCCGGACT TGGCCGGCGG ATCGGAATCG GGATCTCGGG CGTCGCGTTC
GCACTTCAGC AGCTTGGAGT TGCAGGGAAC GCGGATAAAG CCAGAGCGGC GCTTGCACAG
GTAACCAGGA TTGTCCGTGA CGAGGCTTAT CGAGCTTCCT GCGATCTCGC AGAGGAGGTA
GGTGCGTCGC CATGGTTTGA CAGTGTTGAG TTCCACACCG GACCCGTCGC GGATCAGTTG
CCGCCTGAAT TGGTGGAACG CATCCGCACG TATGGGCTCA GGAACGCGCA TATCTTCGGT
TGGGCGCTTA TGGCGGATCG ACCGGCGTTT GCGGTGTCTG TCGGAGTAAC CTCCGATTGG
GCAGTTGATG CGGTGAGAAC TGCAGAAGGG GTCGGCCAGC AAATTGCTTG GCATCAAGAG
ATCTCAGAGG GTTTTGGGAC CAGGTATCTC GCAGAGGTGC TGATCCCGGA CAGCTGGAGT
TTGGAGCAGT CGGTGAATCT GACGGTTCTT AGCGAACAGG CTGACCTCTG GGGAATCACG
GTGCGGTAG
 
Protein sequence
MNVQPQVIER QLIAQSGAFG ASNGTEQRPS WLADPVFDRG VLLSEYTATT DASRAPAVSL 
TLSSSSSTYD VLAEVAVAGR VGMPLLVDLA SVGQPIDDSD SHEPNRAATL QAIERLYAAS
ARGSAVEGIP PMIVISEGDL ADAARLGNVE KYVRVGASQR AIGELLAHPQ PVLEFLGTEV
SGMIFGAGSV VRDGCGGVFG TSAEFVDASE MVAGSVINLC DYLADTPREN NWFDSKRLEE
QIRLAVRELD SMHDVKETLG CLGQPGLGRR IGIGISGVAF ALQQLGVAGN ADKARAALAQ
VTRIVRDEAY RASCDLAEEV GASPWFDSVE FHTGPVADQL PPELVERIRT YGLRNAHIFG
WALMADRPAF AVSVGVTSDW AVDAVRTAEG VGQQIAWHQE ISEGFGTRYL AEVLIPDSWS
LEQSVNLTVL SEQADLWGIT VR