Gene Rpic12D_4719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4719 
Symbol 
ID8017296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp60536 
End bp61306 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content58% 
IMG OID644828410 
Producthypothetical protein 
Protein accessionYP_002979610 
Protein GI241589585 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.102384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCA TTGAGCTCGA TTTCACCGCA ACGAGTCACG TGTCACGGCT TGACGCTGCA 
TTCCGTATCC GGGGAACGCT GGAGTGGCAG CTTCGAGAGG AGTTCCTGAA AGGCGTCCAG
CACGCATTTT CCCGCAGGCC CGATCTTGCC GCACGGCTGC ATGGCGGCCG CATCGTTCGT
TTGGGGAAAC GTGGTGGGTC CCGTTCGTCC CTCTTTCCCA GCAAGAAGAA CGCGGCAGCC
TCCCATGTGG CGGTGTACAT GCCGGTCGAG AGCCGACTAG AGCAGGCCTA TGCGCTCTGC
CTTGAGCGCC ATCCGAGCGT CGTCGCGTAC CGCACCCAAG CGATCTCAAT TGAAATCCCG
GGGGGACGAG CGCATTGGCC AGATTTTCTG ATCCTCGATG ATCGAGGTCG GATCTTTGTC
CGGGAGGTGA AGCACAGCAA GAACTTCCTC ACGGACGACT ATCGCAGCAA GGTCGAGTGG
GTTGACACAT TCCTGTCCCG CGTCGGCGTT GACTACGCCC TCGTCGATCG CGACGAGTTG
CCATCAGATC TCGCGCTACA GCACTTCAAG TCCATCCACC ACAGCTACGC ACGCATCCCC
TCCAAGTTCG AGATCGAGCA TGCGCTTGCA GCGATTCCTT CGCTGCTGCC ATGCCCCTAT
CAGACGCTGG TCGAAGCACT CGGTGATGTC GCCAAACATC TGCTCTTCGT CGGCGTACTC
AAGATCGATT GGGAGAAACC TTTCGATATG GGAGCAACGG TATGGAAATG A
 
Protein sequence
MQTIELDFTA TSHVSRLDAA FRIRGTLEWQ LREEFLKGVQ HAFSRRPDLA ARLHGGRIVR 
LGKRGGSRSS LFPSKKNAAA SHVAVYMPVE SRLEQAYALC LERHPSVVAY RTQAISIEIP
GGRAHWPDFL ILDDRGRIFV REVKHSKNFL TDDYRSKVEW VDTFLSRVGV DYALVDRDEL
PSDLALQHFK SIHHSYARIP SKFEIEHALA AIPSLLPCPY QTLVEALGDV AKHLLFVGVL
KIDWEKPFDM GATVWK